Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS06055

Experiment: Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C)
1,681,844	+		ABI39_RS06045	0.86	-0.6
1,681,914	+				+0.4
1,681,922	+				+0.9
1,681,922	+				-1.8
1,681,934	+				-3.2
1,681,946	-				+0.3
1,681,988	-		ABI39_RS06050	0.11	+1.8
1,682,295	+		ABI39_RS06050	0.44	-2.5
1,682,296	-		ABI39_RS06050	0.44	-1.6
1,682,397	+		ABI39_RS06050	0.55	-2.2
1,682,421	-		ABI39_RS06050	0.57	-0.9
1,682,510	+		ABI39_RS06050	0.67	-1.7
1,682,597	+		ABI39_RS06050	0.76	-1.4
1,682,597	+		ABI39_RS06050	0.76	-2.9
1,682,598	-		ABI39_RS06050	0.76	+0.2
1,682,599	+		ABI39_RS06050	0.76	-0.6
1,682,703	-		ABI39_RS06050	0.88	-1.3
1,682,747	+				+3.4
1,682,748	-				+1.2
1,682,827	-				-1.1
1,683,014	+		ABI39_RS06055	0.14	-1.6
1,683,104	+		ABI39_RS06055	0.21	-0.6
1,683,234	-		ABI39_RS06055	0.31	-3.7
1,683,241	-		ABI39_RS06055	0.32	-4.6
1,683,267	-		ABI39_RS06055	0.34	-4.5
1,683,276	-		ABI39_RS06055	0.35	-1.9
1,683,290	-		ABI39_RS06055	0.36	-1.2
1,683,399	-		ABI39_RS06055	0.44	-3.5
1,683,399	-		ABI39_RS06055	0.44	-1.2
1,683,666	-		ABI39_RS06055	0.65	-5.4
1,683,913	+		ABI39_RS06055	0.85	-2.0
1,683,953	-		ABI39_RS06055	0.88	-4.2
1,683,991	+				+0.8
1,683,992	-				-1.0
1,684,021	-				-1.4
1,684,162	-				-0.3
1,684,190	-				-0.4
1,684,193	-				+1.2
1,684,408	-		ABI39_RS06060	0.13	+1.0
1,684,477	-		ABI39_RS06060	0.16	+1.8
1,684,704	+		ABI39_RS06060	0.26	-2.7
1,684,729	-		ABI39_RS06060	0.27	+0.5
1,684,776	+		ABI39_RS06060	0.30	-2.7
1,684,836	+		ABI39_RS06060	0.32	-2.4
1,684,837	-		ABI39_RS06060	0.32	+0.2
1,684,839	-		ABI39_RS06060	0.32	-0.0
1,684,839	-		ABI39_RS06060	0.32	+1.3
1,684,892	-		ABI39_RS06060	0.35	-0.5
1,684,892	-		ABI39_RS06060	0.35	-0.8
1,684,993	+		ABI39_RS06060	0.39	+0.4
1,685,010	+		ABI39_RS06060	0.40	-0.9