Strain Fitness in Escherichia coli ECOR27 around NOLOHH_08370

Experiment: Bas21

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas21
1,612,605	+				+0.1
1,612,620	+				+0.5
1,612,620	+				+0.9
1,612,626	-				-1.3
1,612,661	-				-1.5
1,612,692	-				-0.3
1,612,796	-				+0.2
1,612,796	-				-1.0
1,612,796	-				+0.6
1,612,891	-	uspA	NOLOHH_08365	0.30	-0.1
1,612,891	-	uspA	NOLOHH_08365	0.30	+0.1
1,613,055	+	uspA	NOLOHH_08365	0.68	-0.2
1,613,055	+	uspA	NOLOHH_08365	0.68	-0.0
1,613,055	+	uspA	NOLOHH_08365	0.68	-0.0
1,613,057	+	uspA	NOLOHH_08365	0.68	+0.1
1,613,057	+	uspA	NOLOHH_08365	0.68	-1.6
1,613,058	-	uspA	NOLOHH_08365	0.69	+1.0
1,613,067	+	uspA	NOLOHH_08365	0.71	+1.0
1,613,068	-	uspA	NOLOHH_08365	0.71	+0.4
1,613,068	-	uspA	NOLOHH_08365	0.71	+0.1
1,613,068	-	uspA	NOLOHH_08365	0.71	-1.9
1,613,068	-	uspA	NOLOHH_08365	0.71	-0.4
1,613,072	+	uspA	NOLOHH_08365	0.72	+0.3
1,613,072	+	uspA	NOLOHH_08365	0.72	-0.6
1,613,072	+	uspA	NOLOHH_08365	0.72	+1.1
1,613,072	+	uspA	NOLOHH_08365	0.72	-1.1
1,613,073	-	uspA	NOLOHH_08365	0.72	+0.5
1,613,073	-	uspA	NOLOHH_08365	0.72	-1.9
1,613,073	-	uspA	NOLOHH_08365	0.72	-0.2
1,613,073	-	uspA	NOLOHH_08365	0.72	-0.5
1,613,073	-	uspA	NOLOHH_08365	0.72	-2.7
1,613,078	+	uspA	NOLOHH_08365	0.73	+0.4
1,613,079	-	uspA	NOLOHH_08365	0.73	+0.2
1,613,106	+	uspA	NOLOHH_08365	0.80	-0.2
1,613,106	+	uspA	NOLOHH_08365	0.80	+1.3
1,613,119	+	uspA	NOLOHH_08365	0.83	-0.1
1,613,185	+				-1.8
1,613,185	+				-0.0
1,613,187	+				+1.2
1,613,187	+				-0.7
1,613,188	-				-0.2
1,613,188	-				+0.3
1,613,188	-				+0.0
1,613,201	-				-0.6
1,613,201	-				+0.6
1,613,201	-				-0.4
1,613,236	-				+0.3
1,613,253	+				-1.0
1,613,276	+				-0.3
1,613,277	-				-0.4
1,613,277	-				+0.4
1,613,277	-				+0.1
1,613,277	-				+0.6
1,613,277	-				+1.7
1,613,315	+				+0.4
1,613,315	+				+0.3
1,613,316	-				-1.2
1,613,316	-				-0.5
1,613,327	+				-1.0
1,613,327	+				-0.1
1,613,327	+				-0.6
1,613,328	-				+0.6
1,613,332	+				-1.0
1,613,332	+				-0.5
1,613,332	+				+0.3
1,613,333	-				-0.5
1,613,334	+				-0.7
1,613,334	+				+0.5
1,613,334	+				-0.6
1,613,375	+				+1.5
1,613,376	-				+0.7
1,613,379	+				-0.1
1,613,379	+				-0.2
1,613,380	-				+0.6
1,613,400	+				-0.9
1,613,400	+				+0.4
1,613,400	+				+0.0
1,613,401	-				-0.6
1,613,401	-				+0.2
1,613,401	-				-0.1
1,613,401	-				-0.9
1,613,401	-				-0.1
1,613,401	-				-0.8
1,613,402	+				-0.2
1,613,403	-				+0.4
1,613,447	+				+0.6
1,613,448	-				-0.0
1,613,448	-				-0.5
1,613,452	+				-0.4
1,613,452	+				-0.8
1,613,452	+				+0.1
1,613,452	+				+1.2
1,613,452	+				+0.6
1,613,452	+				-0.0
1,613,452	+				-0.7
1,613,452	+				-0.1
1,613,453	-				+0.0
1,613,453	-				-0.5
1,613,453	-				-1.3
1,613,453	-				+0.7
1,613,453	-				+0.6
1,613,453	-				-0.1
1,613,456	+				-0.2
1,613,456	+				-0.0
1,613,456	+				+0.6
1,613,456	+				+0.2
1,613,456	+				+0.5
1,613,457	-				-0.1
1,613,457	-				-0.1
1,613,457	-				-1.2
1,613,457	-				+0.1
1,613,512	+				+0.3
1,613,512	+				+0.1
1,613,584	+				-0.2
1,613,584	+				-0.6
1,613,584	+				+0.8
1,613,584	+				+0.1
1,613,584	+				-0.3
1,613,584	+				-0.4
1,613,584	+				-0.7
1,613,584	+				+0.6
1,613,584	+				+0.3
1,613,584	+				+0.8
1,613,585	-				-0.1
1,613,585	-				+0.3
1,613,585	-				-1.4
1,613,585	-				+0.4
1,613,585	-				+0.4
1,613,585	-				+0.4
1,613,585	-				-0.4
1,613,585	-				+0.4
1,613,589	+				-0.6
1,613,590	-				+0.5
1,613,616	+				+0.7
1,613,616	+				-0.3
1,613,616	+				-0.0
1,613,616	+				-0.1
1,613,616	+				-0.2
1,613,617	-				+0.4
1,613,673	+	uspB	NOLOHH_08370	0.26	+0.1
1,613,705	+	uspB	NOLOHH_08370	0.36	+0.7
1,613,711	+	uspB	NOLOHH_08370	0.38	+0.8
1,613,711	+	uspB	NOLOHH_08370	0.38	+0.2
1,613,711	+	uspB	NOLOHH_08370	0.38	+0.2
1,613,711	+	uspB	NOLOHH_08370	0.38	+0.8
1,613,712	-	uspB	NOLOHH_08370	0.38	-0.3
1,613,712	-	uspB	NOLOHH_08370	0.38	+1.1
1,613,712	-	uspB	NOLOHH_08370	0.38	+0.3
1,613,777	+	uspB	NOLOHH_08370	0.57	+0.7
1,613,777	+	uspB	NOLOHH_08370	0.57	-0.2
1,613,777	+	uspB	NOLOHH_08370	0.57	+0.7
1,613,777	+	uspB	NOLOHH_08370	0.57	+0.3
1,613,777	+	uspB	NOLOHH_08370	0.57	-0.0
1,613,777	+	uspB	NOLOHH_08370	0.57	+0.3
1,613,778	-	uspB	NOLOHH_08370	0.57	+1.5
1,613,778	-	uspB	NOLOHH_08370	0.57	-0.5
1,613,778	-	uspB	NOLOHH_08370	0.57	+0.3
1,613,778	-	uspB	NOLOHH_08370	0.57	-0.1
1,613,778	-	uspB	NOLOHH_08370	0.57	+0.7
1,613,779	+	uspB	NOLOHH_08370	0.58	+0.5
1,613,779	+	uspB	NOLOHH_08370	0.58	-0.0
1,613,779	+	uspB	NOLOHH_08370	0.58	+0.5
1,613,780	-	uspB	NOLOHH_08370	0.58	+0.4
1,613,780	-	uspB	NOLOHH_08370	0.58	+1.0
1,613,780	-	uspB	NOLOHH_08370	0.58	-0.2
1,613,783	+	uspB	NOLOHH_08370	0.59	-2.1
1,613,783	+	uspB	NOLOHH_08370	0.59	-0.3
1,613,783	+	uspB	NOLOHH_08370	0.59	+0.5
1,613,783	+	uspB	NOLOHH_08370	0.59	-0.2
1,613,783	+	uspB	NOLOHH_08370	0.59	-0.5
1,613,784	-	uspB	NOLOHH_08370	0.59	+0.3
1,613,784	-	uspB	NOLOHH_08370	0.59	-0.4
1,613,784	-	uspB	NOLOHH_08370	0.59	+0.7
1,613,784	-	uspB	NOLOHH_08370	0.59	-0.2
1,613,919	-				+2.1
1,613,934	-				+0.9
1,613,986	+				+0.0
1,613,987	-				-0.3
1,613,987	-				-0.3
1,613,987	-				+0.5
1,613,992	+				+1.0
1,613,993	-				-0.2
1,614,054	-				-0.1
1,614,090	-				-0.8
1,614,097	-				-0.4
1,614,112	-				-1.7
1,614,144	+	pitA	NOLOHH_08375	0.10	-1.2
1,614,145	-	pitA	NOLOHH_08375	0.10	-1.8
1,614,176	-	pitA	NOLOHH_08375	0.12	-1.6
1,614,176	-	pitA	NOLOHH_08375	0.12	-0.5
1,614,232	+	pitA	NOLOHH_08375	0.16	-1.2
1,614,233	-	pitA	NOLOHH_08375	0.16	-0.6
1,614,299	+	pitA	NOLOHH_08375	0.21	-0.5
1,614,309	+	pitA	NOLOHH_08375	0.21	-1.1
1,614,349	+	pitA	NOLOHH_08375	0.24	-0.9
1,614,363	-	pitA	NOLOHH_08375	0.25	+1.0
1,614,440	+	pitA	NOLOHH_08375	0.30	-0.8
1,614,480	-	pitA	NOLOHH_08375	0.33	-1.4
1,614,506	-	pitA	NOLOHH_08375	0.34	+0.7
1,614,621	+	pitA	NOLOHH_08375	0.42	-1.5
1,614,639	-	pitA	NOLOHH_08375	0.43	-1.4