Strain Fitness in Escherichia coli ECOR27 around NOLOHH_01245

Experiment: Bas21

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas21
139,182	-	fadM	NOLOHH_01235	0.12	+0.6
139,182	-	fadM	NOLOHH_01235	0.12	-0.8
139,199	-	fadM	NOLOHH_01235	0.17	+0.3
139,199	-	fadM	NOLOHH_01235	0.17	+0.9
139,208	-	fadM	NOLOHH_01235	0.19	+0.7
139,220	-	fadM	NOLOHH_01235	0.22	+2.2
139,220	-	fadM	NOLOHH_01235	0.22	-0.4
139,220	-	fadM	NOLOHH_01235	0.22	-0.1
139,222	+	fadM	NOLOHH_01235	0.22	+0.0
139,222	+	fadM	NOLOHH_01235	0.22	-0.4
139,223	-	fadM	NOLOHH_01235	0.23	-0.1
139,261	+	fadM	NOLOHH_01235	0.32	+0.0
139,261	+	fadM	NOLOHH_01235	0.32	-0.5
139,261	+	fadM	NOLOHH_01235	0.32	-0.5
139,318	+	fadM	NOLOHH_01235	0.46	-2.4
139,319	-	fadM	NOLOHH_01235	0.47	-0.2
139,319	-	fadM	NOLOHH_01235	0.47	+0.6
139,323	-	fadM	NOLOHH_01235	0.48	+1.3
139,334	+	fadM	NOLOHH_01235	0.50	-1.0
139,353	+	fadM	NOLOHH_01235	0.55	+0.5
139,357	+	fadM	NOLOHH_01235	0.56	+0.1
139,357	+	fadM	NOLOHH_01235	0.56	-0.1
139,357	+	fadM	NOLOHH_01235	0.56	+1.0
139,357	+	fadM	NOLOHH_01235	0.56	+0.6
139,357	+	fadM	NOLOHH_01235	0.56	-0.9
139,357	+	fadM	NOLOHH_01235	0.56	+0.8
139,358	-	fadM	NOLOHH_01235	0.56	+0.2
139,358	-	fadM	NOLOHH_01235	0.56	-0.0
139,420	+	fadM	NOLOHH_01235	0.72	+0.5
139,531	+				-1.2
139,545	+				-0.3
139,545	+				-0.3
139,546	-				+0.3
139,546	-				+0.8
139,557	-				-0.4
139,557	-				+0.9
139,557	-				-0.3
139,558	+				-0.5
139,558	+				+0.0
139,558	+				+0.3
139,559	-				+0.7
139,559	-				+0.6
139,559	-				-1.6
139,563	-				+0.7
139,563	-				+0.2
139,613	+				-0.7
139,623	-				+0.1
139,623	-				-1.7
139,634	+				-0.6
139,637	+				+0.3
139,648	+				-0.6
139,648	+				+1.0
139,649	-				+0.6
139,688	+	ybaV	NOLOHH_01240	0.17	+0.1
139,688	+	ybaV	NOLOHH_01240	0.17	+0.2
139,801	+	ybaV	NOLOHH_01240	0.47	+1.4
139,802	-	ybaV	NOLOHH_01240	0.48	+0.2
139,804	+	ybaV	NOLOHH_01240	0.48	+0.1
139,805	-	ybaV	NOLOHH_01240	0.48	+0.4
139,805	-	ybaV	NOLOHH_01240	0.48	+0.7
139,858	+	ybaV	NOLOHH_01240	0.63	-0.0
139,858	+	ybaV	NOLOHH_01240	0.63	-0.1
139,859	-	ybaV	NOLOHH_01240	0.63	-0.7
139,859	-	ybaV	NOLOHH_01240	0.63	-0.1
139,859	-	ybaV	NOLOHH_01240	0.63	+0.4
139,981	+				-0.3
139,981	+				+1.3
139,997	-				-1.1
139,997	-				+0.2
140,052	+				-1.3
140,324	-				+0.3
140,465	-	ppiD	NOLOHH_01245	0.17	-0.7
140,866	-	ppiD	NOLOHH_01245	0.38	-0.5
141,709	-	ppiD	NOLOHH_01245	0.83	-1.1
142,052	-				+1.2
142,052	-				-1.4
142,149	-				+0.4
142,149	-				-0.1
142,149	-				-0.2
142,165	+				-0.3
142,165	+				-1.1
142,166	-				-1.4
142,211	+				+0.5
142,237	-				+0.1
142,357	+	hupB	NOLOHH_01250	0.54	+0.1
142,358	-	hupB	NOLOHH_01250	0.54	-0.6
142,358	-	hupB	NOLOHH_01250	0.54	+0.6
142,358	-	hupB	NOLOHH_01250	0.54	-0.6
142,358	-	hupB	NOLOHH_01250	0.54	-1.0
142,358	-	hupB	NOLOHH_01250	0.54	+0.0
142,401	+	hupB	NOLOHH_01250	0.70	-0.5
142,401	+	hupB	NOLOHH_01250	0.70	-0.8
142,409	-	hupB	NOLOHH_01250	0.73	-0.1
142,432	-	hupB	NOLOHH_01250	0.81	-0.2
142,432	-	hupB	NOLOHH_01250	0.81	-2.5
142,438	-	hupB	NOLOHH_01250	0.84	-0.3
142,477	-				+0.1
142,498	+				-0.4
142,499	-				-0.3
142,499	-				+0.2
142,499	-				-0.7
142,505	+				-0.2
142,505	+				+0.2
142,506	-				-0.7
142,506	-				-0.6
142,530	+				-1.3
142,547	+				+0.3
142,547	+				+0.3
142,547	+				-0.7
142,547	+				-0.7
142,547	+				-0.1
142,548	-				-0.2
142,548	-				+0.4
142,548	-				-0.2
142,548	-				+0.4
142,548	-				-0.7
142,550	-				+0.5
142,569	+				+0.0
142,581	+				+0.2
142,581	+				-0.3
142,582	-				+0.4
142,584	+				+0.1
142,609	-				-0.1
142,667	-				-0.4
142,667	-				+1.0
142,841	+				+0.9
142,996	+	lon_P403L	NOLOHH_01255	0.13	-1.2