Experiment: Bas21
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt NOLOHH_00125 and NOLOHH_00130 are separated by 454 nucleotides NOLOHH_00130 and NOLOHH_00135 are separated by 201 nucleotides NOLOHH_00135 and NOLOHH_00140 are separated by 168 nucleotides NOLOHH_00140 and NOLOHH_00145 are separated by 54 nucleotides NOLOHH_00145 and NOLOHH_00150 are separated by 152 nucleotides
NOLOHH_00125: NOLOHH_00125 - hypothetical protein, at 12,602 to 13,024
_00125
NOLOHH_00130: NOLOHH_00130 - hypothetical protein, at 13,479 to 13,583
_00130
NOLOHH_00135: NOLOHH_00135 - hypothetical protein, at 13,785 to 14,243
_00135
NOLOHH_00140: NOLOHH_00140 - hypothetical protein, at 14,412 to 14,699
_00140
NOLOHH_00145: NOLOHH_00145 - hypothetical protein, at 14,754 to 14,996
_00145
NOLOHH_00150: NOLOHH_00150 - hypothetical protein, at 15,149 to 15,304
_00150
Position (kb) 13
14
15 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 12.792 kb on + strand, within NOLOHH_00125 at 12.792 kb on + strand, within NOLOHH_00125 at 12.793 kb on - strand, within NOLOHH_00125 at 12.793 kb on - strand, within NOLOHH_00125 at 12.796 kb on + strand, within NOLOHH_00125 at 12.796 kb on + strand, within NOLOHH_00125 at 12.796 kb on + strand, within NOLOHH_00125 at 12.796 kb on + strand, within NOLOHH_00125 at 12.796 kb on + strand, within NOLOHH_00125 at 12.796 kb on + strand, within NOLOHH_00125 at 12.797 kb on - strand, within NOLOHH_00125 at 12.797 kb on - strand, within NOLOHH_00125 at 12.797 kb on - strand, within NOLOHH_00125 at 12.797 kb on - strand, within NOLOHH_00125 at 12.797 kb on - strand, within NOLOHH_00125 at 12.797 kb on - strand, within NOLOHH_00125 at 12.797 kb on - strand, within NOLOHH_00125 at 12.797 kb on - strand, within NOLOHH_00125 at 12.799 kb on + strand, within NOLOHH_00125 at 12.799 kb on + strand, within NOLOHH_00125 at 12.846 kb on - strand, within NOLOHH_00125 at 12.851 kb on + strand, within NOLOHH_00125 at 12.852 kb on - strand, within NOLOHH_00125 at 12.852 kb on - strand, within NOLOHH_00125 at 12.876 kb on - strand, within NOLOHH_00125 at 12.876 kb on - strand, within NOLOHH_00125 at 12.876 kb on - strand, within NOLOHH_00125 at 12.878 kb on + strand, within NOLOHH_00125 at 12.878 kb on + strand, within NOLOHH_00125 at 12.878 kb on + strand, within NOLOHH_00125 at 12.879 kb on - strand, within NOLOHH_00125 at 12.879 kb on - strand, within NOLOHH_00125 at 12.879 kb on - strand, within NOLOHH_00125 at 12.895 kb on + strand, within NOLOHH_00125 at 12.895 kb on + strand, within NOLOHH_00125 at 12.895 kb on + strand, within NOLOHH_00125 at 12.895 kb on + strand, within NOLOHH_00125 at 12.895 kb on + strand, within NOLOHH_00125 at 12.895 kb on + strand, within NOLOHH_00125 at 12.895 kb on + strand, within NOLOHH_00125 at 12.896 kb on - strand, within NOLOHH_00125 at 12.896 kb on - strand, within NOLOHH_00125 at 12.896 kb on - strand, within NOLOHH_00125 at 12.896 kb on - strand, within NOLOHH_00125 at 12.896 kb on - strand, within NOLOHH_00125 at 12.896 kb on - strand, within NOLOHH_00125 at 12.911 kb on - strand, within NOLOHH_00125 at 12.912 kb on + strand, within NOLOHH_00125 at 12.913 kb on - strand, within NOLOHH_00125 at 12.913 kb on - strand, within NOLOHH_00125 at 12.913 kb on - strand, within NOLOHH_00125 at 12.913 kb on - strand, within NOLOHH_00125 at 12.924 kb on + strand, within NOLOHH_00125 at 12.924 kb on + strand, within NOLOHH_00125 at 12.924 kb on + strand, within NOLOHH_00125 at 12.924 kb on + strand, within NOLOHH_00125 at 12.925 kb on - strand, within NOLOHH_00125 at 12.925 kb on - strand, within NOLOHH_00125 at 12.925 kb on - strand, within NOLOHH_00125 at 12.935 kb on + strand, within NOLOHH_00125 at 12.935 kb on + strand, within NOLOHH_00125 at 12.935 kb on + strand, within NOLOHH_00125 at 12.935 kb on + strand, within NOLOHH_00125 at 12.935 kb on + strand, within NOLOHH_00125 at 12.935 kb on + strand, within NOLOHH_00125 at 12.935 kb on + strand, within NOLOHH_00125 at 12.935 kb on + strand, within NOLOHH_00125 at 12.935 kb on + strand, within NOLOHH_00125 at 12.935 kb on + strand, within NOLOHH_00125 at 12.935 kb on + strand, within NOLOHH_00125 at 12.936 kb on - strand, within NOLOHH_00125 at 12.937 kb on + strand, within NOLOHH_00125 at 12.938 kb on - strand, within NOLOHH_00125 at 12.938 kb on - strand, within NOLOHH_00125 at 12.938 kb on - strand, within NOLOHH_00125 at 12.952 kb on + strand, within NOLOHH_00125 at 12.973 kb on + strand, within NOLOHH_00125 at 12.983 kb on + strand at 12.984 kb on - strand at 12.984 kb on - strand at 12.999 kb on - strand at 13.020 kb on + strand at 13.051 kb on - strand at 13.051 kb on - strand at 13.357 kb on + strand at 13.376 kb on + strand at 13.376 kb on + strand at 13.376 kb on + strand at 13.377 kb on - strand at 13.377 kb on - strand at 13.377 kb on - strand at 13.426 kb on + strand at 13.427 kb on - strand at 13.427 kb on - strand at 13.427 kb on - strand at 13.427 kb on - strand at 13.467 kb on + strand at 13.468 kb on - strand at 13.478 kb on + strand at 13.478 kb on + strand at 13.478 kb on + strand at 13.479 kb on - strand at 13.555 kb on + strand, within NOLOHH_00130 at 13.555 kb on + strand, within NOLOHH_00130 at 13.555 kb on + strand, within NOLOHH_00130 at 13.665 kb on + strand at 13.927 kb on + strand, within NOLOHH_00135 at 13.927 kb on + strand, within NOLOHH_00135 at 14.328 kb on + strand at 14.333 kb on + strand at 14.333 kb on + strand at 14.333 kb on + strand at 14.333 kb on + strand at 14.333 kb on + strand at 14.411 kb on + strand at 14.412 kb on - strand at 14.412 kb on - strand at 14.417 kb on + strand at 14.417 kb on + strand at 14.417 kb on + strand at 14.417 kb on + strand at 14.418 kb on - strand at 14.434 kb on + strand at 14.434 kb on + strand at 14.458 kb on + strand, within NOLOHH_00140 at 14.458 kb on + strand, within NOLOHH_00140 at 14.459 kb on - strand, within NOLOHH_00140 at 14.459 kb on - strand, within NOLOHH_00140 at 14.459 kb on - strand, within NOLOHH_00140 at 14.460 kb on + strand, within NOLOHH_00140 at 14.460 kb on + strand, within NOLOHH_00140 at 14.460 kb on + strand, within NOLOHH_00140 at 14.460 kb on + strand, within NOLOHH_00140 at 14.460 kb on + strand, within NOLOHH_00140 at 14.460 kb on + strand, within NOLOHH_00140 at 14.460 kb on + strand, within NOLOHH_00140 at 14.460 kb on + strand, within NOLOHH_00140 at 14.460 kb on + strand, within NOLOHH_00140 at 14.461 kb on - strand, within NOLOHH_00140 at 14.461 kb on - strand, within NOLOHH_00140 at 14.461 kb on - strand, within NOLOHH_00140 at 14.461 kb on - strand, within NOLOHH_00140 at 14.461 kb on - strand, within NOLOHH_00140 at 14.490 kb on + strand, within NOLOHH_00140 at 14.528 kb on + strand, within NOLOHH_00140 at 14.529 kb on - strand, within NOLOHH_00140 at 14.548 kb on + strand, within NOLOHH_00140 at 14.549 kb on - strand, within NOLOHH_00140 at 14.549 kb on - strand, within NOLOHH_00140 at 14.549 kb on - strand, within NOLOHH_00140 at 14.549 kb on - strand, within NOLOHH_00140 at 14.549 kb on - strand, within NOLOHH_00140 at 14.550 kb on + strand, within NOLOHH_00140 at 14.550 kb on + strand, within NOLOHH_00140 at 14.550 kb on + strand, within NOLOHH_00140 at 14.550 kb on + strand, within NOLOHH_00140 at 14.551 kb on - strand, within NOLOHH_00140 at 14.560 kb on + strand, within NOLOHH_00140 at 14.561 kb on - strand, within NOLOHH_00140 at 14.561 kb on - strand, within NOLOHH_00140 at 14.561 kb on - strand, within NOLOHH_00140 at 14.564 kb on + strand, within NOLOHH_00140 at 14.564 kb on + strand, within NOLOHH_00140 at 14.589 kb on - strand, within NOLOHH_00140 at 14.647 kb on + strand, within NOLOHH_00140 at 14.661 kb on + strand, within NOLOHH_00140 at 14.669 kb on + strand, within NOLOHH_00140 at 14.670 kb on - strand, within NOLOHH_00140 at 14.676 kb on - strand at 14.676 kb on - strand at 14.676 kb on - strand at 14.676 kb on - strand at 14.676 kb on - strand at 14.676 kb on - strand at 14.705 kb on - strand at 14.708 kb on + strand at 14.709 kb on - strand at 14.709 kb on - strand at 14.709 kb on - strand at 14.742 kb on - strand at 14.742 kb on - strand at 14.750 kb on - strand at 14.754 kb on - strand at 14.762 kb on + strand at 14.763 kb on - strand at 14.763 kb on - strand at 14.763 kb on - strand at 14.763 kb on - strand at 14.763 kb on - strand at 14.763 kb on - strand at 14.817 kb on + strand, within NOLOHH_00145 at 14.817 kb on + strand, within NOLOHH_00145 at 14.818 kb on - strand, within NOLOHH_00145 at 14.881 kb on - strand, within NOLOHH_00145 at 14.887 kb on - strand, within NOLOHH_00145 at 14.892 kb on + strand, within NOLOHH_00145 at 14.892 kb on + strand, within NOLOHH_00145 at 14.892 kb on + strand, within NOLOHH_00145 at 14.892 kb on + strand, within NOLOHH_00145 at 14.892 kb on + strand, within NOLOHH_00145 at 14.892 kb on + strand, within NOLOHH_00145 at 14.892 kb on + strand, within NOLOHH_00145 at 14.892 kb on + strand, within NOLOHH_00145 at 14.892 kb on + strand, within NOLOHH_00145 at 14.892 kb on + strand, within NOLOHH_00145 at 14.892 kb on + strand, within NOLOHH_00145 at 14.892 kb on + strand, within NOLOHH_00145 at 14.893 kb on - strand, within NOLOHH_00145 at 14.893 kb on - strand, within NOLOHH_00145 at 14.893 kb on - strand, within NOLOHH_00145 at 14.893 kb on - strand, within NOLOHH_00145 at 14.893 kb on - strand, within NOLOHH_00145 at 14.893 kb on - strand, within NOLOHH_00145 at 14.955 kb on - strand, within NOLOHH_00145 at 15.094 kb on + strand at 15.096 kb on + strand at 15.101 kb on + strand at 15.101 kb on + strand at 15.101 kb on + strand at 15.101 kb on + strand at 15.101 kb on + strand at 15.101 kb on + strand at 15.101 kb on + strand at 15.101 kb on + strand at 15.101 kb on + strand at 15.101 kb on + strand at 15.101 kb on + strand at 15.101 kb on + strand at 15.101 kb on + strand at 15.102 kb on - strand at 15.102 kb on - strand at 15.102 kb on - strand at 15.102 kb on - strand at 15.102 kb on - strand at 15.102 kb on - strand at 15.102 kb on - strand at 15.102 kb on - strand at 15.213 kb on + strand, within NOLOHH_00150 at 15.213 kb on + strand, within NOLOHH_00150 at 15.213 kb on + strand, within NOLOHH_00150
Per-strain Table
Position Strand Gene LocusTag Fraction Bas21 remove 12,792 + NOLOHH_00125 0.45 +0.3 12,792 + NOLOHH_00125 0.45 -0.2 12,793 - NOLOHH_00125 0.45 +0.7 12,793 - NOLOHH_00125 0.45 -0.3 12,796 + NOLOHH_00125 0.46 +0.1 12,796 + NOLOHH_00125 0.46 +0.0 12,796 + NOLOHH_00125 0.46 +0.3 12,796 + NOLOHH_00125 0.46 +0.3 12,796 + NOLOHH_00125 0.46 -0.3 12,796 + NOLOHH_00125 0.46 +0.3 12,797 - NOLOHH_00125 0.46 -0.2 12,797 - NOLOHH_00125 0.46 -0.1 12,797 - NOLOHH_00125 0.46 +1.7 12,797 - NOLOHH_00125 0.46 +0.8 12,797 - NOLOHH_00125 0.46 -0.0 12,797 - NOLOHH_00125 0.46 -0.8 12,797 - NOLOHH_00125 0.46 -0.0 12,797 - NOLOHH_00125 0.46 +0.4 12,799 + NOLOHH_00125 0.47 -0.1 12,799 + NOLOHH_00125 0.47 +0.5 12,846 - NOLOHH_00125 0.58 -0.4 12,851 + NOLOHH_00125 0.59 -0.5 12,852 - NOLOHH_00125 0.59 +0.3 12,852 - NOLOHH_00125 0.59 -1.5 12,876 - NOLOHH_00125 0.65 +0.4 12,876 - NOLOHH_00125 0.65 -0.2 12,876 - NOLOHH_00125 0.65 +0.0 12,878 + NOLOHH_00125 0.65 -0.3 12,878 + NOLOHH_00125 0.65 -0.1 12,878 + NOLOHH_00125 0.65 -0.0 12,879 - NOLOHH_00125 0.65 -0.5 12,879 - NOLOHH_00125 0.65 +0.0 12,879 - NOLOHH_00125 0.65 +0.8 12,895 + NOLOHH_00125 0.69 +0.9 12,895 + NOLOHH_00125 0.69 -0.1 12,895 + NOLOHH_00125 0.69 +0.3 12,895 + NOLOHH_00125 0.69 +0.4 12,895 + NOLOHH_00125 0.69 -0.2 12,895 + NOLOHH_00125 0.69 -0.1 12,895 + NOLOHH_00125 0.69 -0.4 12,896 - NOLOHH_00125 0.70 -0.5 12,896 - NOLOHH_00125 0.70 -0.0 12,896 - NOLOHH_00125 0.70 +0.3 12,896 - NOLOHH_00125 0.70 -0.6 12,896 - NOLOHH_00125 0.70 +0.1 12,896 - NOLOHH_00125 0.70 +0.0 12,911 - NOLOHH_00125 0.73 +0.2 12,912 + NOLOHH_00125 0.73 +0.1 12,913 - NOLOHH_00125 0.74 +0.4 12,913 - NOLOHH_00125 0.74 -0.3 12,913 - NOLOHH_00125 0.74 +0.8 12,913 - NOLOHH_00125 0.74 -0.4 12,924 + NOLOHH_00125 0.76 +0.3 12,924 + NOLOHH_00125 0.76 -0.1 12,924 + NOLOHH_00125 0.76 +0.2 12,924 + NOLOHH_00125 0.76 -0.2 12,925 - NOLOHH_00125 0.76 -0.1 12,925 - NOLOHH_00125 0.76 +0.8 12,925 - NOLOHH_00125 0.76 +0.2 12,935 + NOLOHH_00125 0.79 +0.0 12,935 + NOLOHH_00125 0.79 -1.0 12,935 + NOLOHH_00125 0.79 -0.1 12,935 + NOLOHH_00125 0.79 +0.1 12,935 + NOLOHH_00125 0.79 +0.4 12,935 + NOLOHH_00125 0.79 -0.1 12,935 + NOLOHH_00125 0.79 +2.5 12,935 + NOLOHH_00125 0.79 +0.5 12,935 + NOLOHH_00125 0.79 +0.0 12,935 + NOLOHH_00125 0.79 +0.0 12,935 + NOLOHH_00125 0.79 -0.4 12,936 - NOLOHH_00125 0.79 -0.3 12,937 + NOLOHH_00125 0.79 +0.0 12,938 - NOLOHH_00125 0.79 -0.3 12,938 - NOLOHH_00125 0.79 +0.0 12,938 - NOLOHH_00125 0.79 +0.2 12,952 + NOLOHH_00125 0.83 +0.4 12,973 + NOLOHH_00125 0.88 -0.2 12,983 + +0.5 12,984 - -0.4 12,984 - -0.0 12,999 - +0.1 13,020 + -0.6 13,051 - +0.4 13,051 - -0.1 13,357 + -0.5 13,376 + -0.2 13,376 + +0.4 13,376 + -0.4 13,377 - -0.5 13,377 - +0.4 13,377 - -0.5 13,426 + +0.2 13,427 - -0.2 13,427 - +0.0 13,427 - +0.2 13,427 - -0.1 13,467 + -0.3 13,468 - +0.6 13,478 + +0.2 13,478 + -0.9 13,478 + -0.1 13,479 - +0.3 13,555 + NOLOHH_00130 0.72 +0.3 13,555 + NOLOHH_00130 0.72 -0.4 13,555 + NOLOHH_00130 0.72 +0.6 13,665 + -0.1 13,927 + NOLOHH_00135 0.31 -0.9 13,927 + NOLOHH_00135 0.31 -0.5 14,328 + +0.7 14,333 + -0.5 14,333 + +0.1 14,333 + +0.3 14,333 + +2.2 14,333 + +0.5 14,411 + -0.0 14,412 - -0.5 14,412 - -0.2 14,417 + -0.1 14,417 + -0.7 14,417 + +0.3 14,417 + +0.2 14,418 - +1.0 14,434 + +0.0 14,434 + -0.1 14,458 + NOLOHH_00140 0.16 +0.4 14,458 + NOLOHH_00140 0.16 +0.6 14,459 - NOLOHH_00140 0.16 +0.3 14,459 - NOLOHH_00140 0.16 -0.2 14,459 - NOLOHH_00140 0.16 -0.1 14,460 + NOLOHH_00140 0.17 -0.2 14,460 + NOLOHH_00140 0.17 +0.7 14,460 + NOLOHH_00140 0.17 +0.2 14,460 + NOLOHH_00140 0.17 +0.1 14,460 + NOLOHH_00140 0.17 +0.3 14,460 + NOLOHH_00140 0.17 +0.2 14,460 + NOLOHH_00140 0.17 +0.3 14,460 + NOLOHH_00140 0.17 -0.1 14,460 + NOLOHH_00140 0.17 +0.1 14,461 - NOLOHH_00140 0.17 +0.6 14,461 - NOLOHH_00140 0.17 +0.4 14,461 - NOLOHH_00140 0.17 -0.2 14,461 - NOLOHH_00140 0.17 +0.1 14,461 - NOLOHH_00140 0.17 +0.8 14,490 + NOLOHH_00140 0.27 +0.1 14,528 + NOLOHH_00140 0.40 +0.2 14,529 - NOLOHH_00140 0.41 +0.4 14,548 + NOLOHH_00140 0.47 +0.3 14,549 - NOLOHH_00140 0.48 +0.5 14,549 - NOLOHH_00140 0.48 -0.9 14,549 - NOLOHH_00140 0.48 -0.3 14,549 - NOLOHH_00140 0.48 -0.6 14,549 - NOLOHH_00140 0.48 -0.3 14,550 + NOLOHH_00140 0.48 +0.1 14,550 + NOLOHH_00140 0.48 -0.3 14,550 + NOLOHH_00140 0.48 +0.4 14,550 + NOLOHH_00140 0.48 -0.1 14,551 - NOLOHH_00140 0.48 -0.4 14,560 + NOLOHH_00140 0.51 -0.3 14,561 - NOLOHH_00140 0.52 +0.5 14,561 - NOLOHH_00140 0.52 -0.0 14,561 - NOLOHH_00140 0.52 +0.1 14,564 + NOLOHH_00140 0.53 +0.4 14,564 + NOLOHH_00140 0.53 +0.2 14,589 - NOLOHH_00140 0.61 -0.5 14,647 + NOLOHH_00140 0.82 +0.0 14,661 + NOLOHH_00140 0.86 -0.1 14,669 + NOLOHH_00140 0.89 -0.2 14,670 - NOLOHH_00140 0.90 -0.4 14,676 - -0.1 14,676 - +0.2 14,676 - -0.0 14,676 - -0.7 14,676 - -0.1 14,676 - -0.0 14,705 - -1.0 14,708 + -0.2 14,709 - +0.2 14,709 - +0.5 14,709 - +0.9 14,742 - -0.2 14,742 - -0.6 14,750 - -0.1 14,754 - +0.2 14,762 + +0.4 14,763 - +0.3 14,763 - +0.4 14,763 - +1.9 14,763 - +0.2 14,763 - +1.1 14,763 - +0.5 14,817 + NOLOHH_00145 0.26 -0.6 14,817 + NOLOHH_00145 0.26 -0.7 14,818 - NOLOHH_00145 0.26 -0.3 14,881 - NOLOHH_00145 0.52 +0.2 14,887 - NOLOHH_00145 0.55 +0.3 14,892 + NOLOHH_00145 0.57 -0.3 14,892 + NOLOHH_00145 0.57 +0.1 14,892 + NOLOHH_00145 0.57 +1.0 14,892 + NOLOHH_00145 0.57 +0.1 14,892 + NOLOHH_00145 0.57 -0.1 14,892 + NOLOHH_00145 0.57 +1.2 14,892 + NOLOHH_00145 0.57 +0.7 14,892 + NOLOHH_00145 0.57 -0.0 14,892 + NOLOHH_00145 0.57 -0.2 14,892 + NOLOHH_00145 0.57 -0.2 14,892 + NOLOHH_00145 0.57 +0.3 14,892 + NOLOHH_00145 0.57 +0.3 14,893 - NOLOHH_00145 0.57 +3.5 14,893 - NOLOHH_00145 0.57 -0.5 14,893 - NOLOHH_00145 0.57 +0.0 14,893 - NOLOHH_00145 0.57 -0.2 14,893 - NOLOHH_00145 0.57 +0.0 14,893 - NOLOHH_00145 0.57 +0.4 14,955 - NOLOHH_00145 0.83 +0.2 15,094 + +0.6 15,096 + +0.1 15,101 + +0.3 15,101 + +0.5 15,101 + -0.1 15,101 + +0.0 15,101 + -0.2 15,101 + -1.1 15,101 + +0.2 15,101 + -0.1 15,101 + +0.2 15,101 + +0.5 15,101 + +0.3 15,101 + -0.5 15,101 + -0.4 15,102 - -0.8 15,102 - +0.2 15,102 - -0.2 15,102 - -0.3 15,102 - -0.3 15,102 - -0.5 15,102 - +0.5 15,102 - -2.3 15,213 + NOLOHH_00150 0.41 -1.0 15,213 + NOLOHH_00150 0.41 +0.1 15,213 + NOLOHH_00150 0.41 -0.4
Or see this region's nucleotide sequence