Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS11375

Experiment: Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C)
3,025,076	-				-0.6
3,025,258	-				+4.6
3,025,279	+		ABI39_RS11375	0.13	+2.0
3,025,327	+		ABI39_RS11375	0.21	-0.1
3,025,357	-		ABI39_RS11375	0.26	-0.8
3,025,358	-		ABI39_RS11375	0.26	+0.2
3,025,358	-		ABI39_RS11375	0.26	+3.6
3,025,394	-		ABI39_RS11375	0.31	+1.6
3,025,418	-		ABI39_RS11375	0.35	+2.2
3,025,592	-		ABI39_RS11375	0.63	-0.6
3,025,627	-		ABI39_RS11375	0.69	+2.2
3,025,627	-		ABI39_RS11375	0.69	+0.6
3,025,630	+		ABI39_RS11375	0.69	+0.5
3,025,630	+		ABI39_RS11375	0.69	+1.6
3,025,714	-		ABI39_RS11375	0.82	-0.4
3,025,834	+				+0.6
3,025,847	+				+0.6
3,025,919	-				+1.2
3,026,023	+		ABI39_RS11380	0.25	+0.8
3,026,053	+		ABI39_RS11380	0.29	+5.7
3,026,054	-		ABI39_RS11380	0.30	-0.4
3,026,055	+		ABI39_RS11380	0.30	-2.6
3,026,140	-		ABI39_RS11380	0.43	+1.8
3,026,178	+		ABI39_RS11380	0.49	-1.4
3,026,179	-		ABI39_RS11380	0.49	-1.8
3,026,181	+		ABI39_RS11380	0.49	+0.2
3,026,181	+		ABI39_RS11380	0.49	+0.8
3,026,185	+		ABI39_RS11380	0.50	-0.8
3,026,186	-		ABI39_RS11380	0.50	+1.6
3,026,186	-		ABI39_RS11380	0.50	-1.1
3,026,193	-		ABI39_RS11380	0.51	-1.7
3,026,197	-		ABI39_RS11380	0.52	-1.1
3,026,359	-		ABI39_RS11380	0.77	+1.5
3,026,362	-		ABI39_RS11380	0.78	+1.0
3,026,362	-		ABI39_RS11380	0.78	+0.3
3,026,362	-		ABI39_RS11380	0.78	-1.2
3,026,384	-		ABI39_RS11380	0.81	-0.5
3,026,628	-				+0.5
3,026,653	+				+1.2