Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS19350

Experiment: Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C)
4,844,392	+		ABI39_RS19345	0.14	-0.4
4,844,427	+		ABI39_RS19345	0.17	-2.0
4,844,519	-		ABI39_RS19345	0.26	-2.3
4,844,662	-		ABI39_RS19345	0.39	-0.3
4,844,930	-		ABI39_RS19345	0.65	+0.3
4,844,968	+		ABI39_RS19345	0.68	+1.6
4,845,178	-		ABI39_RS19345	0.88	-0.1
4,845,181	+		ABI39_RS19345	0.88	+0.3
4,845,185	-		ABI39_RS19345	0.89	-0.0
4,845,285	+				+0.9
4,845,320	+				+0.3
4,845,321	-				-0.1
4,845,321	-				-1.0
4,845,322	+				-0.6
4,845,356	+				+1.1
4,845,489	-		ABI39_RS19350	0.27	+2.4
4,845,606	-		ABI39_RS19350	0.45	-1.0
4,845,688	+		ABI39_RS19350	0.57	-1.4
4,845,884	-		ABI39_RS19350	0.86	+2.4
4,845,930	+				+1.1
4,845,964	-				+3.9
4,846,159	+		ABI39_RS19355	0.41	-0.7
4,846,214	+		ABI39_RS19355	0.54	-1.1
4,846,215	-		ABI39_RS19355	0.55	+0.0
4,846,215	-		ABI39_RS19355	0.55	+1.5
4,846,403	+				+0.2
4,846,490	-				+0.1
4,846,657	+				-0.2
4,846,709	-				+2.4
4,846,764	-		ABI39_RS19360	0.10	+0.8
4,846,771	+		ABI39_RS19360	0.10	+0.6
4,846,771	+		ABI39_RS19360	0.10	+0.6
4,846,844	-		ABI39_RS19360	0.13	-0.1