Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS06580

Experiment: Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C)
1,822,124	+		ABI39_RS06575	0.82	+0.1
1,822,232	-		ABI39_RS06575	0.86	-0.1
1,822,342	+		ABI39_RS06575	0.89	+1.4
1,822,343	-		ABI39_RS06575	0.89	+0.6
1,822,433	-				-1.5
1,822,436	+				+0.1
1,822,711	-				+0.2
1,822,713	+				+2.1
1,822,732	+				-0.9
1,822,733	-				+3.3
1,822,761	-				+1.2
1,822,811	-				+1.1
1,822,837	+				+2.8
1,822,921	-				+0.6
1,822,963	+				-0.4
1,822,994	-				+0.7
1,823,162	+				-0.1
1,823,162	+				-0.7
1,823,187	+				-0.1
1,823,193	+				+0.3
1,823,256	-				-0.9
1,823,318	+		ABI39_RS06580	0.10	-0.5
1,823,321	-		ABI39_RS06580	0.10	+0.2
1,823,350	-		ABI39_RS06580	0.12	+2.1
1,823,350	-		ABI39_RS06580	0.12	+2.2
1,823,352	+		ABI39_RS06580	0.12	-0.6
1,823,457	-		ABI39_RS06580	0.17	-0.6
1,823,518	-		ABI39_RS06580	0.20	-0.2
1,823,726	+		ABI39_RS06580	0.31	-1.0
1,823,726	+		ABI39_RS06580	0.31	-0.9
1,823,727	-		ABI39_RS06580	0.31	-0.3
1,823,727	-		ABI39_RS06580	0.31	+3.0
1,823,809	+		ABI39_RS06580	0.36	+1.9
1,823,810	-		ABI39_RS06580	0.36	+0.4
1,823,866	-		ABI39_RS06580	0.38	+0.6
1,823,877	-		ABI39_RS06580	0.39	+3.6
1,823,944	-		ABI39_RS06580	0.43	+0.2
1,823,969	+		ABI39_RS06580	0.44	-1.2
1,824,012	+		ABI39_RS06580	0.46	-1.3
1,824,070	-		ABI39_RS06580	0.49	+1.7
1,824,181	+		ABI39_RS06580	0.55	+0.2
1,824,185	+		ABI39_RS06580	0.55	+0.5
1,824,185	+		ABI39_RS06580	0.55	-0.4
1,824,269	+		ABI39_RS06580	0.59	+0.7
1,824,270	-		ABI39_RS06580	0.59	-0.8
1,824,387	+		ABI39_RS06580	0.65	-1.0
1,824,454	-		ABI39_RS06580	0.69	+0.7
1,824,502	-		ABI39_RS06580	0.71	+3.6
1,824,527	-		ABI39_RS06580	0.73	+1.2
1,824,527	-		ABI39_RS06580	0.73	-0.5
1,824,565	-		ABI39_RS06580	0.75	+0.6
1,824,646	-		ABI39_RS06580	0.79	-0.6
1,824,741	-		ABI39_RS06580	0.84	+2.2
1,824,758	+		ABI39_RS06580	0.85	-0.4
1,824,818	+		ABI39_RS06580	0.88	-0.2
1,824,819	-		ABI39_RS06580	0.88	-1.1
1,824,819	-		ABI39_RS06580	0.88	+1.3
1,824,892	-				+1.0
1,824,926	-				-0.5
1,824,958	-				-0.6
1,825,071	+				+0.1
1,825,084	-				+0.2
1,825,087	-				+1.5
1,825,088	+				-0.6
1,825,109	+				+0.7
1,825,282	+				-0.2
1,825,361	+				+1.6
1,825,466	-				+0.1
1,825,650	+		ABI39_RS06585	0.11	-0.5
1,825,671	+		ABI39_RS06585	0.11	-0.3
1,825,875	+		ABI39_RS06585	0.16	+0.7
1,825,936	-		ABI39_RS06585	0.18	-0.3