Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS22360

Experiment: Experiment:PE, population C11, passage 1 (PE-S-C11-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:PE, population C11, passage 1 (PE-S-C11-P1)
4,269,309	-		LU632_RS22350	0.64	+1.1
4,269,309	-		LU632_RS22350	0.64	+0.5
4,269,309	-		LU632_RS22350	0.64	-1.6
4,269,539	-				+0.2
4,269,682	+		LU632_RS22355	0.16	-0.2
4,269,682	+		LU632_RS22355	0.16	+0.8
4,270,067	+		LU632_RS22355	0.76	+0.0
4,270,067	+		LU632_RS22355	0.76	-1.6
4,270,068	-		LU632_RS22355	0.76	+0.6
4,270,108	+		LU632_RS22355	0.82	-0.2
4,270,156	-		LU632_RS22355	0.89	+0.1
4,270,198	+				+2.0
4,270,198	+				+0.1
4,270,199	-				-2.5
4,270,214	-				+0.2
4,270,214	-				+0.5
4,270,215	+				+1.3
4,270,217	+				+1.4
4,270,217	+				+0.1
4,270,218	-				+1.6
4,270,218	-				-0.8
4,270,257	+				+0.9
4,270,285	+				-1.0
4,270,291	+				+1.4
4,270,296	+				-1.6
4,270,296	+				+0.9
4,270,524	+		LU632_RS22360	0.85	-0.8
4,270,524	+		LU632_RS22360	0.85	+0.4
4,270,525	-		LU632_RS22360	0.86	+1.1
4,270,527	-		LU632_RS22360	0.86	+1.2
4,270,717	-				-1.3
4,271,009	-				+0.6
4,271,009	-				-1.4
4,271,249	+				-1.1
4,271,250	-				-0.2
4,271,287	+	pgi	LU632_RS22365	0.11	-0.1
4,271,385	-	pgi	LU632_RS22365	0.17	-0.7