Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS22270

Experiment: Experiment:PE, population C11, passage 1 (PE-S-C11-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:PE, population C11, passage 1 (PE-S-C11-P1)
4,254,782	+		LU632_RS22260	0.41	+3.0
4,254,844	+		LU632_RS22260	0.63	-2.4
4,254,844	+		LU632_RS22260	0.63	-2.4
4,254,844	+		LU632_RS22260	0.63	+1.4
4,254,875	+		LU632_RS22260	0.73	+0.3
4,254,911	-		LU632_RS22260	0.85	+0.2
4,254,926	+				+0.4
4,254,927	-				-1.1
4,254,927	-				-0.7
4,254,968	+				-0.3
4,254,969	-				+1.8
4,254,970	+				+1.0
4,254,987	+				-3.1
4,255,772	+				+0.5
4,255,772	+				+0.1
4,255,858	+		LU632_RS22270	0.60	-2.6
4,255,859	-		LU632_RS22270	0.60	-0.6
4,255,859	-		LU632_RS22270	0.60	-2.2
4,255,969	-				-3.2
4,255,971	+				+0.5
4,255,972	-				-1.2
4,255,972	-				+0.9
4,255,972	-				-0.5
4,255,972	-				+0.0
4,255,972	-				+0.5
4,256,018	+				-0.9
4,256,019	-				+0.9
4,256,040	-				-3.0
4,256,057	+				-2.2
4,256,128	-		LU632_RS22275	0.34	+2.1
4,256,134	-		LU632_RS22275	0.37	+2.1
4,256,272	-				+1.0
4,256,275	-				+1.2
4,256,408	+				+1.4
4,256,416	-				+1.1
4,256,419	+				+1.5
4,256,439	-				-1.8
4,256,439	-				+1.3
4,256,559	-		LU632_RS22280	0.17	-1.2
4,256,769	+		LU632_RS22280	0.47	+1.3
4,256,769	+		LU632_RS22280	0.47	-0.5
4,256,769	+		LU632_RS22280	0.47	+0.8
4,256,770	-		LU632_RS22280	0.48	+1.6