Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS20760

Experiment: Experiment:PE, population C11, passage 1 (PE-S-C11-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:PE, population C11, passage 1 (PE-S-C11-P1)
3,962,588	-		LU632_RS20755	0.58	-0.9
3,963,040	+				+0.5
3,963,394	+		LU632_RS20760	0.87	-2.0
3,963,435	+				-1.0
3,963,440	+				+1.9
3,963,440	+				+0.4
3,963,441	-				-1.6
3,963,562	+				-0.1
3,963,562	+				+1.0
3,963,562	+				+1.4
3,963,563	-				+1.6
3,963,705	+		LU632_RS20765	0.22	+0.1
3,963,705	+		LU632_RS20765	0.22	-3.0
3,963,706	-		LU632_RS20765	0.22	+2.8
3,963,758	+		LU632_RS20765	0.26	+0.9
3,963,758	+		LU632_RS20765	0.26	-2.7
3,963,759	-		LU632_RS20765	0.26	+0.2
3,963,759	-		LU632_RS20765	0.26	+0.4
3,963,765	+		LU632_RS20765	0.27	-1.8
3,963,766	-		LU632_RS20765	0.27	-0.4
3,963,789	+		LU632_RS20765	0.29	+0.6
3,963,789	+		LU632_RS20765	0.29	+3.5
3,963,790	-		LU632_RS20765	0.29	+1.9
3,963,837	+		LU632_RS20765	0.33	-0.9
3,963,838	-		LU632_RS20765	0.33	-0.2
3,963,838	-		LU632_RS20765	0.33	-2.1
3,963,838	-		LU632_RS20765	0.33	-2.4
3,963,842	-		LU632_RS20765	0.33	+0.5
3,963,842	-		LU632_RS20765	0.33	+0.5
3,964,024	+		LU632_RS20765	0.49	-1.3
3,964,025	-		LU632_RS20765	0.49	+0.6
3,964,025	-		LU632_RS20765	0.49	-0.3
3,964,025	-		LU632_RS20765	0.49	+1.1
3,964,025	-		LU632_RS20765	0.49	-2.3
3,964,048	+		LU632_RS20765	0.51	+2.6
3,964,048	+		LU632_RS20765	0.51	-2.1
3,964,049	-		LU632_RS20765	0.51	+3.8
3,964,070	-		LU632_RS20765	0.53	+1.9
3,964,161	+		LU632_RS20765	0.60	+0.6
3,964,162	-		LU632_RS20765	0.60	-0.7
3,964,226	+		LU632_RS20765	0.66	-0.3
3,964,226	+		LU632_RS20765	0.66	-1.8
3,964,226	+		LU632_RS20765	0.66	-0.0
3,964,227	-		LU632_RS20765	0.66	-1.7
3,964,227	-		LU632_RS20765	0.66	-0.2
3,964,227	-		LU632_RS20765	0.66	-0.0
3,964,243	-		LU632_RS20765	0.67	+1.0
3,964,291	+		LU632_RS20765	0.71	-1.2
3,964,291	+		LU632_RS20765	0.71	+2.1
3,964,293	+		LU632_RS20765	0.72	-1.7
3,964,293	+		LU632_RS20765	0.72	+0.5
3,964,294	-		LU632_RS20765	0.72	-3.4
3,964,375	-		LU632_RS20765	0.78	-1.5