Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS20040

Experiment: Experiment:PE, population C11, passage 1 (PE-S-C11-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:PE, population C11, passage 1 (PE-S-C11-P1)
3,812,596	+		LU632_RS20035	0.27	+0.5
3,812,659	+		LU632_RS20035	0.33	-0.8
3,812,701	+		LU632_RS20035	0.37	-2.7
3,812,702	-		LU632_RS20035	0.37	+0.4
3,812,702	-		LU632_RS20035	0.37	-0.9
3,812,702	-		LU632_RS20035	0.37	-2.6
3,812,745	+		LU632_RS20035	0.41	-0.2
3,812,756	-		LU632_RS20035	0.42	+2.0
3,812,756	-		LU632_RS20035	0.42	+2.7
3,812,782	+		LU632_RS20035	0.45	+0.6
3,812,786	+		LU632_RS20035	0.45	+0.5
3,812,786	+		LU632_RS20035	0.45	+0.7
3,812,786	+		LU632_RS20035	0.45	-0.6
3,812,786	+		LU632_RS20035	0.45	+0.2
3,812,787	-		LU632_RS20035	0.45	-1.3
3,812,794	+		LU632_RS20035	0.46	-0.7
3,812,794	+		LU632_RS20035	0.46	+0.5
3,812,795	-		LU632_RS20035	0.46	+0.4
3,812,835	-		LU632_RS20035	0.50	-0.6
3,812,876	+		LU632_RS20035	0.54	+1.1
3,812,876	+		LU632_RS20035	0.54	+0.8
3,812,881	+		LU632_RS20035	0.54	-0.8
3,812,882	-		LU632_RS20035	0.54	-1.1
3,812,906	+		LU632_RS20035	0.57	+1.7
3,812,907	-		LU632_RS20035	0.57	+1.0
3,812,946	+		LU632_RS20035	0.61	+1.1
3,812,956	+		LU632_RS20035	0.62	+2.2
3,812,958	+		LU632_RS20035	0.62	+1.2
3,812,959	-		LU632_RS20035	0.62	+0.4
3,813,004	-		LU632_RS20035	0.66	+0.7
3,813,177	+		LU632_RS20035	0.83	+0.3
3,813,178	-		LU632_RS20035	0.83	-0.9
3,813,398	-				-0.8
3,813,428	+				-0.3
3,813,429	-				+0.4
3,813,476	+				+2.2
3,814,834	+				+0.1
3,814,868	+				-0.6
3,814,869	-				-0.6
3,814,869	-				-2.3
3,814,872	+				+2.6
3,814,927	+				+2.8
3,814,927	+				-1.2
3,814,927	+				-3.3
3,814,927	+				-3.3
3,814,928	-				-2.5
3,814,928	-				+1.3
3,814,928	-				-0.3
3,814,928	-				+1.0
3,815,129	+	fhuB	LU632_RS20045	0.12	+0.3
3,815,277	+	fhuB	LU632_RS20045	0.20	+1.3
3,815,326	+	fhuB	LU632_RS20045	0.22	+0.3
3,815,326	+	fhuB	LU632_RS20045	0.22	-2.2
3,815,327	-	fhuB	LU632_RS20045	0.22	+0.7
3,815,543	-	fhuB	LU632_RS20045	0.33	+0.4
3,815,648	+	fhuB	LU632_RS20045	0.39	-0.8