Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS18355

Experiment: Experiment:PE, population C11, passage 1 (PE-S-C11-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:PE, population C11, passage 1 (PE-S-C11-P1)
3,468,069	+	tig	LU632_RS18350	0.76	-0.3
3,468,091	+	tig	LU632_RS18350	0.78	-0.4
3,468,091	+	tig	LU632_RS18350	0.78	-0.8
3,468,092	-	tig	LU632_RS18350	0.78	-3.9
3,468,094	-	tig	LU632_RS18350	0.78	+0.3
3,468,108	+	tig	LU632_RS18350	0.79	+1.5
3,468,108	+	tig	LU632_RS18350	0.79	-1.6
3,468,109	-	tig	LU632_RS18350	0.79	+2.8
3,468,164	-	tig	LU632_RS18350	0.83	-0.8
3,468,299	-				-1.6
3,468,386	-				+0.3
3,468,390	-				-1.6
3,468,550	+				-2.0
3,468,653	+				+0.1
3,468,701	-				-0.1
3,468,701	-				+0.5
3,470,086	+				-0.0
3,470,086	+				-1.4
3,470,121	+				-0.9
3,470,122	-				+0.5
3,470,216	+	bolA	LU632_RS18360	0.26	+0.3
3,470,217	-	bolA	LU632_RS18360	0.27	-1.1
3,470,217	-	bolA	LU632_RS18360	0.27	-3.2
3,470,269	+	bolA	LU632_RS18360	0.43	+0.9
3,470,270	-	bolA	LU632_RS18360	0.43	-1.1
3,470,333	+	bolA	LU632_RS18360	0.63	-2.0
3,470,334	-	bolA	LU632_RS18360	0.64	+0.8
3,470,447	+				-1.4
3,470,454	-				-0.5
3,470,500	+				+0.9
3,470,501	-				+0.9
3,470,558	+				+0.6
3,470,593	+				+2.8
3,470,610	+				+1.0
3,470,701	+		LU632_RS18365	0.15	-1.6
3,470,731	+		LU632_RS18365	0.20	-3.0
3,470,815	-		LU632_RS18365	0.35	-0.9
3,470,891	+		LU632_RS18365	0.48	-2.0
3,470,892	-		LU632_RS18365	0.48	-0.4
3,470,945	+		LU632_RS18365	0.57	-0.4
3,470,945	+		LU632_RS18365	0.57	-0.3
3,470,946	-		LU632_RS18365	0.57	+1.0
3,470,946	-		LU632_RS18365	0.57	-0.2
3,470,946	-		LU632_RS18365	0.57	+0.1
3,470,946	-		LU632_RS18365	0.57	+0.6
3,470,980	+		LU632_RS18365	0.63	+1.6
3,470,981	-		LU632_RS18365	0.63	-0.8
3,470,981	-		LU632_RS18365	0.63	+0.4
3,470,999	-		LU632_RS18365	0.66	+1.3