Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS18220

Experiment: Experiment:PE, population C11, passage 1 (PE-S-C11-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:PE, population C11, passage 1 (PE-S-C11-P1)
3,441,828	-		LU632_RS18210	0.45	+0.1
3,441,837	+		LU632_RS18210	0.47	+0.2
3,441,979	-		LU632_RS18210	0.80	-0.7
3,442,007	+		LU632_RS18210	0.87	-0.4
3,442,008	-		LU632_RS18210	0.87	+1.4
3,442,045	+				-0.3
3,442,045	+				+2.5
3,442,045	+				+0.7
3,442,045	+				+2.1
3,442,154	+				+1.5
3,442,155	-				+0.9
3,442,155	-				-0.4
3,442,200	+				-1.8
3,442,218	+				-0.9
3,442,229	+				-0.6
3,442,378	+		LU632_RS18215	0.43	-1.5
3,442,379	-		LU632_RS18215	0.43	-0.0
3,442,383	+		LU632_RS18215	0.46	+1.6
3,442,387	+		LU632_RS18215	0.49	+1.1
3,442,388	-		LU632_RS18215	0.50	-1.3
3,442,412	-		LU632_RS18215	0.67	+1.7
3,442,616	-				-3.1
3,442,620	-				+2.3
3,442,838	-				-1.0
3,443,904	+				+0.7
3,443,918	+				+0.2
3,443,928	+				+2.0
3,443,950	-				+0.1
3,443,950	-				+0.1
3,444,052	+				-1.2
3,444,053	-				-1.4
3,444,101	+				+0.8
3,444,102	-				+0.3
3,444,132	+				-2.4
3,444,148	-		LU632_RS18225	0.11	-0.2
3,444,148	-		LU632_RS18225	0.11	-0.6
3,444,148	-		LU632_RS18225	0.11	+0.8
3,444,236	+		LU632_RS18225	0.21	+0.0
3,444,299	+		LU632_RS18225	0.28	-2.1
3,444,439	-		LU632_RS18225	0.44	-0.2
3,444,449	+		LU632_RS18225	0.45	-2.9
3,444,503	+		LU632_RS18225	0.51	-1.4
3,444,503	+		LU632_RS18225	0.51	-0.3
3,444,504	-		LU632_RS18225	0.52	+0.3
3,444,529	+		LU632_RS18225	0.54	-0.1
3,444,743	+		LU632_RS18225	0.79	+0.5
3,444,756	-		LU632_RS18225	0.80	-0.3