Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS17325

Experiment: Experiment:PE, population C11, passage 1 (PE-S-C11-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:PE, population C11, passage 1 (PE-S-C11-P1)
3,255,844	+				+0.8
3,255,845	-				+1.5
3,255,862	+				-0.7
3,255,862	+				-0.7
3,255,863	-				-1.7
3,255,863	-				-0.1
3,255,882	+				-0.4
3,255,892	+				-1.2
3,255,892	+				-1.4
3,255,892	+				+0.8
3,256,028	+	fruK	LU632_RS17320	0.16	-0.5
3,256,201	+	fruK	LU632_RS17320	0.35	-1.9
3,256,201	+	fruK	LU632_RS17320	0.35	+0.9
3,256,202	-	fruK	LU632_RS17320	0.35	+1.9
3,256,323	+	fruK	LU632_RS17320	0.47	+0.6
3,256,324	-	fruK	LU632_RS17320	0.48	-1.8
3,256,548	+	fruK	LU632_RS17320	0.71	+0.9
3,256,549	-	fruK	LU632_RS17320	0.72	+0.2
3,257,016	-	fruB	LU632_RS17325	0.18	-1.6
3,257,179	+	fruB	LU632_RS17325	0.32	-2.4
3,257,179	+	fruB	LU632_RS17325	0.32	-3.3
3,257,179	+	fruB	LU632_RS17325	0.32	-0.6
3,257,180	-	fruB	LU632_RS17325	0.32	-0.7
3,257,180	-	fruB	LU632_RS17325	0.32	-1.4
3,257,182	-	fruB	LU632_RS17325	0.33	+0.5
3,257,198	-	fruB	LU632_RS17325	0.34	-2.5
3,257,198	-	fruB	LU632_RS17325	0.34	-2.2
3,257,240	+	fruB	LU632_RS17325	0.38	-0.1
3,257,477	+	fruB	LU632_RS17325	0.59	-3.4
3,257,606	+	fruB	LU632_RS17325	0.70	-1.7
3,257,607	-	fruB	LU632_RS17325	0.70	-1.7
3,257,650	-	fruB	LU632_RS17325	0.74	+0.3
3,257,665	+	fruB	LU632_RS17325	0.75	-3.6
3,257,726	+	fruB	LU632_RS17325	0.81	-1.7
3,257,726	+	fruB	LU632_RS17325	0.81	-0.2
3,257,730	+	fruB	LU632_RS17325	0.81	-3.0
3,257,788	+	fruB	LU632_RS17325	0.86	-0.1
3,257,788	+	fruB	LU632_RS17325	0.86	-0.6
3,257,789	-	fruB	LU632_RS17325	0.86	-3.4
3,257,792	+	fruB	LU632_RS17325	0.86	+0.3
3,257,792	+	fruB	LU632_RS17325	0.86	-3.0
3,257,792	+	fruB	LU632_RS17325	0.86	-1.7
3,257,792	+	fruB	LU632_RS17325	0.86	-2.6
3,257,830	+	fruB	LU632_RS17325	0.90	-1.2
3,257,831	-	fruB	LU632_RS17325	0.90	-1.2
3,257,837	+				-3.0
3,257,842	-				-2.0
3,257,945	+				-1.2
3,257,945	+				-2.4
3,257,945	+				-0.4
3,257,946	-				-3.2
3,257,946	-				-1.6
3,257,946	-				-0.2
3,257,946	-				-1.8
3,257,946	-				-3.3
3,258,073	-				-1.8
3,258,237	-				-1.3
3,258,241	+				-0.9
3,258,313	-		LU632_RS17330	0.17	+1.4
3,258,313	-		LU632_RS17330	0.17	+0.4
3,258,313	-		LU632_RS17330	0.17	+2.5
3,258,422	-		LU632_RS17330	0.37	-0.4
3,258,425	+		LU632_RS17330	0.38	+0.3
3,258,456	+		LU632_RS17330	0.44	-1.3
3,258,458	+		LU632_RS17330	0.44	+0.5
3,258,504	+		LU632_RS17330	0.53	+0.5
3,258,552	-		LU632_RS17330	0.62	+1.0
3,258,642	+		LU632_RS17330	0.79	-0.5
3,258,642	+		LU632_RS17330	0.79	+1.2
3,258,643	-		LU632_RS17330	0.79	-1.2
3,258,646	+		LU632_RS17330	0.79	+0.5
3,258,647	-		LU632_RS17330	0.80	-1.8
3,258,690	+		LU632_RS17330	0.88	-0.7