Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS16855
Experiment: Experiment:PE, population C11, passage 1 (PE-S-C11-P1)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Experiment:PE, population C11, passage 1 (PE-S-C11-P1) |
|---|---|---|---|---|---|
| remove | |||||
| 3,175,059 | + | -1.9 | |||
| 3,175,106 | + | +0.2 | |||
| 3,175,107 | - | -1.1 | |||
| 3,175,317 | + | LU632_RS16850 | 0.44 | +1.8 | |
| 3,175,317 | + | LU632_RS16850 | 0.44 | +1.6 | |
| 3,175,317 | + | LU632_RS16850 | 0.44 | +1.4 | |
| 3,175,318 | - | LU632_RS16850 | 0.45 | +0.3 | |
| 3,175,318 | - | LU632_RS16850 | 0.45 | +0.9 | |
| 3,175,371 | - | LU632_RS16850 | 0.72 | +0.6 | |
| 3,176,388 | - | LU632_RS16855 | 0.84 | -1.7 |
Or see this region's nucleotide sequence