Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14885

Experiment: Experiment:PE, population C11, passage 1 (PE-S-C11-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:PE, population C11, passage 1 (PE-S-C11-P1)
2,830,422	+		LU632_RS14880	0.46	+1.2
2,830,422	+		LU632_RS14880	0.46	-1.4
2,830,424	+		LU632_RS14880	0.46	-2.8
2,830,424	+		LU632_RS14880	0.46	+0.7
2,830,540	+		LU632_RS14880	0.56	-0.6
2,830,942	+				-0.9
2,830,954	+				+2.4
2,830,954	+				-1.5
2,830,955	-				+0.3
2,830,955	-				-1.4
2,830,989	+				+1.2
2,830,990	-				-1.7
2,831,002	+				-0.3
2,831,002	+				+0.2
2,831,003	-				+0.8
2,831,050	-				-0.2
2,831,090	-				+1.9
2,831,131	-				+0.6
2,831,131	-				-0.8
2,831,175	+				+4.3
2,831,250	+				+1.2
2,831,251	-				-1.4
2,831,286	+				+1.0
2,831,287	-				-1.1
2,831,375	-				-1.0
2,831,376	+				-0.6
2,831,376	+				+0.1
2,831,376	+				+2.3
2,831,376	+				-0.8
2,831,376	+				+0.7
2,831,376	+				+0.7
2,831,376	+				-0.2
2,831,377	-				-0.9
2,831,377	-				+0.7
2,831,377	-				-1.6
2,831,434	+				-1.4
2,831,479	+				-2.0
2,831,496	-				+1.4
2,831,572	-		LU632_RS14885	0.13	+0.1
2,831,580	+		LU632_RS14885	0.14	-0.5
2,831,580	+		LU632_RS14885	0.14	+0.5
2,831,580	+		LU632_RS14885	0.14	-3.0
2,831,580	+		LU632_RS14885	0.14	+1.9
2,831,580	+		LU632_RS14885	0.14	-0.2
2,831,623	+		LU632_RS14885	0.17	+0.4
2,831,624	-		LU632_RS14885	0.17	+1.0
2,831,624	-		LU632_RS14885	0.17	-1.2
2,831,684	+		LU632_RS14885	0.21	-0.4
2,831,707	-		LU632_RS14885	0.23	+1.4
2,831,749	+		LU632_RS14885	0.25	+0.4
2,831,749	+		LU632_RS14885	0.25	+3.5
2,831,789	+		LU632_RS14885	0.28	+1.1
2,831,974	+		LU632_RS14885	0.41	+2.2
2,831,975	-		LU632_RS14885	0.41	-0.3
2,831,992	+		LU632_RS14885	0.42	-1.9
2,831,993	-		LU632_RS14885	0.42	+0.3
2,832,002	-		LU632_RS14885	0.43	+0.1
2,832,088	+		LU632_RS14885	0.49	-0.4
2,832,088	+		LU632_RS14885	0.49	+0.4
2,832,089	-		LU632_RS14885	0.49	-0.4
2,832,177	+		LU632_RS14885	0.55	-1.4
2,832,195	+		LU632_RS14885	0.56	+0.2
2,832,195	+		LU632_RS14885	0.56	+0.4
2,832,284	+		LU632_RS14885	0.62	+1.0
2,832,346	+		LU632_RS14885	0.67	+0.1
2,832,347	-		LU632_RS14885	0.67	-1.6
2,832,380	+		LU632_RS14885	0.69	+0.3
2,832,474	+		LU632_RS14885	0.75	-1.2
2,832,519	+		LU632_RS14885	0.78	+2.4
2,832,585	+		LU632_RS14885	0.83	-0.5
2,832,586	-		LU632_RS14885	0.83	-1.8
2,832,629	+		LU632_RS14885	0.86	-0.7
2,832,709	+				-1.0
2,832,710	-				+0.3
2,832,800	+				+0.8
2,832,800	+				-0.6
2,832,800	+				-0.8
2,832,800	+				-2.6
2,832,800	+				+0.9
2,832,801	-				+0.0
2,832,805	-				+0.0
2,833,030	+				-0.6
2,833,107	-				+0.8
2,833,191	+				-1.5
2,833,577	+				+3.0
2,833,577	+				+0.2
2,833,577	+				+2.9