Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14460

Experiment: Experiment:PE, population C11, passage 1 (PE-S-C11-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:PE, population C11, passage 1 (PE-S-C11-P1)
2,755,227	+				+2.0
2,755,228	-				+0.1
2,755,291	-				-0.2
2,755,480	+		LU632_RS14455	0.21	-1.4
2,755,481	-		LU632_RS14455	0.21	-0.4
2,755,490	+		LU632_RS14455	0.22	-0.2
2,755,519	+		LU632_RS14455	0.25	-0.6
2,755,520	-		LU632_RS14455	0.25	-2.8
2,755,579	+		LU632_RS14455	0.32	-2.4
2,755,620	+		LU632_RS14455	0.37	+0.8
2,755,621	-		LU632_RS14455	0.37	-0.5
2,755,621	-		LU632_RS14455	0.37	+0.1
2,755,648	+		LU632_RS14455	0.40	+0.1
2,755,656	-		LU632_RS14455	0.41	+0.7
2,755,663	+		LU632_RS14455	0.41	-0.3
2,755,664	-		LU632_RS14455	0.42	-0.9
2,755,762	+		LU632_RS14455	0.53	+1.2
2,755,763	-		LU632_RS14455	0.53	-2.2
2,755,854	+		LU632_RS14455	0.63	-1.4
2,755,855	-		LU632_RS14455	0.63	+0.1
2,755,864	+		LU632_RS14455	0.64	-1.7
2,755,865	-		LU632_RS14455	0.64	+2.3
2,755,985	-		LU632_RS14455	0.78	+1.4
2,755,997	-		LU632_RS14455	0.79	+0.1
2,755,997	-		LU632_RS14455	0.79	-0.3
2,755,997	-		LU632_RS14455	0.79	-1.6
2,755,999	-		LU632_RS14455	0.79	-0.9
2,756,153	+				-1.9
2,756,154	-				+0.6
2,756,164	+				+0.5
2,756,165	-				+1.3
2,756,165	-				-0.1
2,756,166	+				+0.2
2,756,166	+				+1.4
2,756,166	+				+1.5
2,756,166	+				-2.9
2,756,167	-				+1.0
2,756,167	-				+0.6
2,756,369	+		LU632_RS14460	0.26	+0.5
2,756,407	+		LU632_RS14460	0.31	-2.1
2,756,408	+		LU632_RS14460	0.31	-0.5
2,756,452	+		LU632_RS14460	0.37	-0.8
2,756,452	+		LU632_RS14460	0.37	+0.6
2,756,494	+		LU632_RS14460	0.43	+0.7
2,757,207	+		LU632_RS14465	0.31	-1.2
2,757,288	+		LU632_RS14465	0.39	-0.4
2,757,364	+		LU632_RS14465	0.47	-0.3
2,757,467	+		LU632_RS14465	0.57	+0.5
2,757,521	+		LU632_RS14465	0.63	-0.5
2,757,535	+		LU632_RS14465	0.64	-3.6
2,757,535	+		LU632_RS14465	0.64	+0.5
2,757,796	-				+1.1
2,757,834	-				+1.3
2,757,863	+				+0.5