Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS12655

Experiment: Experiment:PE, population C11, passage 1 (PE-S-C11-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:PE, population C11, passage 1 (PE-S-C11-P1)
2,408,254	+		LU632_RS12645	0.53	+1.2
2,408,394	+				+0.4
2,408,419	-				-2.3
2,408,419	-				+0.6
2,408,520	+		LU632_RS12650	0.86	-0.6
2,408,544	+				-3.2
2,409,420	+		LU632_RS12655	0.65	-2.6
2,410,345	+				-1.6
2,410,345	+				-2.7
2,410,449	+		LU632_RS12665	0.13	-1.1
2,410,449	+		LU632_RS12665	0.13	+1.0
2,410,449	+		LU632_RS12665	0.13	+0.8
2,410,450	+		LU632_RS12665	0.13	-0.7
2,410,669	+		LU632_RS12665	0.80	+2.8
2,410,669	+		LU632_RS12665	0.80	+1.5
2,410,720	-				+1.6
2,410,788	-		LU632_RS12670	0.24	-0.1
2,410,792	-		LU632_RS12670	0.26	-2.0
2,410,796	+		LU632_RS12670	0.28	+0.9