Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS11170

Experiment: Experiment:PE, population C11, passage 1 (PE-S-C11-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:PE, population C11, passage 1 (PE-S-C11-P1)
2,134,942	+	pykF	LU632_RS11145	0.90	-0.4
2,135,006	-				-0.3
2,135,095	-				-2.5
2,135,101	+				+0.8
2,135,240	-		LU632_RS11150	0.76	+2.5
2,135,324	+				+0.0
2,135,374	+				+1.3
2,135,452	+		LU632_RS11155	0.13	-3.0
2,135,510	+		LU632_RS11155	0.88	+0.4
2,135,882	-				+1.1
2,135,890	+				+0.6
2,135,933	-				+3.6
2,135,997	+		LU632_RS11170	0.12	+0.4
2,136,025	+		LU632_RS11170	0.14	+0.1
2,136,037	+		LU632_RS11170	0.15	-0.6
2,136,050	-		LU632_RS11170	0.16	+1.9
2,136,178	-		LU632_RS11170	0.25	+1.2
2,136,381	-		LU632_RS11170	0.40	+3.5
2,136,506	+		LU632_RS11170	0.49	-0.6
2,136,507	-		LU632_RS11170	0.49	+2.2
2,136,507	-		LU632_RS11170	0.49	+1.3
2,136,507	-		LU632_RS11170	0.49	-0.8
2,136,507	-		LU632_RS11170	0.49	-0.0
2,136,526	+		LU632_RS11170	0.50	+1.5
2,136,526	+		LU632_RS11170	0.50	-0.6
2,136,787	-		LU632_RS11170	0.69	+1.5
2,136,819	+		LU632_RS11170	0.72	+2.3
2,136,888	+		LU632_RS11170	0.77	+0.1
2,136,888	+		LU632_RS11170	0.77	-1.9
2,136,921	-		LU632_RS11170	0.79	-3.2
2,136,933	+		LU632_RS11170	0.80	+1.2
2,136,984	+		LU632_RS11170	0.84	+1.0
2,136,984	+		LU632_RS11170	0.84	+1.2
2,136,984	+		LU632_RS11170	0.84	-2.3
2,136,985	-		LU632_RS11170	0.84	+0.1
2,136,985	-		LU632_RS11170	0.84	+1.9
2,136,985	-		LU632_RS11170	0.84	-1.5
2,136,996	-		LU632_RS11170	0.85	+1.4
2,136,996	-		LU632_RS11170	0.85	+1.7
2,137,036	+		LU632_RS11170	0.87	+1.4
2,137,036	+		LU632_RS11170	0.87	-0.6
2,137,160	+				+1.9
2,137,162	+				+0.2
2,137,211	+				-0.7
2,137,212	-				+1.0
2,137,212	-				+2.6
2,137,212	-				-1.3
2,137,272	-				-0.1
2,137,272	-				-0.4
2,137,272	-				+0.3
2,137,343	+				+0.7
2,137,368	-				+1.3
2,137,368	-				+1.4
2,137,368	-				-2.6
2,137,372	+				-1.5
2,137,386	+				-1.6
2,137,387	-				-2.6
2,137,431	+				-0.4
2,138,137	+				-0.1
2,138,138	-				-3.8