Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS10665

Experiment: Experiment:PE, population C11, passage 1 (PE-S-C11-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:PE, population C11, passage 1 (PE-S-C11-P1)
2,033,095	+				-0.2
2,033,095	+				+0.8
2,033,233	-				-0.3
2,033,442	+				+1.6
2,033,555	-				+0.3
2,033,595	-				-0.7
2,033,763	-		LU632_RS10660	0.36	+0.7
2,034,022	-		LU632_RS10665	0.14	-2.1
2,034,145	+		LU632_RS10665	0.55	-2.3
2,034,152	+		LU632_RS10665	0.58	-2.7
2,034,591	+				+0.4
2,034,746	+		LU632_RS10670	0.25	-0.9
2,034,819	-		LU632_RS10670	0.38	+1.6
2,034,819	-		LU632_RS10670	0.38	+0.1
2,034,855	+		LU632_RS10670	0.44	-1.9
2,034,855	+		LU632_RS10670	0.44	+0.7
2,034,948	+		LU632_RS10670	0.61	+0.4
2,034,957	-		LU632_RS10670	0.62	-2.5
2,034,998	+		LU632_RS10670	0.70	+1.6
2,034,999	-		LU632_RS10670	0.70	-0.5
2,035,023	+		LU632_RS10670	0.74	-2.3
2,035,023	+		LU632_RS10670	0.74	+0.4
2,035,187	-				-1.9
2,035,190	-				+1.0
2,035,192	-				-2.0
2,035,226	+				+1.0
2,035,227	-				-1.3
2,035,239	+				+2.5
2,035,242	+				+1.3