Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS09935

Experiment: Experiment:PE, population C11, passage 1 (PE-S-C11-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:PE, population C11, passage 1 (PE-S-C11-P1)
1,898,624	-	pepN	LU632_RS09930	0.84	-0.5
1,898,687	-	pepN	LU632_RS09930	0.86	-0.3
1,898,922	-				-0.5
1,898,942	+				+0.3
1,898,956	+				-0.2
1,899,167	+				+0.2
1,899,259	+				-2.7
1,899,259	+				+0.8
1,899,259	+				+3.0
1,899,260	-				-0.7
1,899,263	-				+0.7
1,899,263	-				-1.0
1,899,306	-				-1.2
1,899,336	-		LU632_RS09935	0.20	+1.9
1,899,370	-		LU632_RS09935	0.44	-0.1
1,899,378	+		LU632_RS09935	0.49	+1.1