Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS09000

Experiment: Experiment:PE, population C11, passage 1 (PE-S-C11-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:PE, population C11, passage 1 (PE-S-C11-P1)
1,695,223	-	modC	LU632_RS08990	0.56	-0.5
1,695,223	-	modC	LU632_RS08990	0.56	+1.2
1,695,223	-	modC	LU632_RS08990	0.56	-2.1
1,695,223	-	modC	LU632_RS08990	0.56	-0.7
1,695,228	+	modC	LU632_RS08990	0.57	+0.5
1,695,362	+	modC	LU632_RS08990	0.69	+0.1
1,695,397	+	modC	LU632_RS08990	0.73	+0.7
1,695,397	+	modC	LU632_RS08990	0.73	+1.6
1,695,397	+	modC	LU632_RS08990	0.73	-1.2
1,695,398	-	modC	LU632_RS08990	0.73	-0.1
1,695,511	+	modC	LU632_RS08990	0.83	+1.6
1,695,555	+	modC	LU632_RS08990	0.88	+2.6
1,695,579	+	modC	LU632_RS08990	0.90	+1.5
1,695,602	-				+1.7
1,695,662	-				-3.2
1,697,597	+				+0.6
1,697,610	-				-0.9
1,697,623	+		LU632_RS09005	0.10	-0.2
1,697,639	+		LU632_RS09005	0.12	+0.6
1,697,639	+		LU632_RS09005	0.12	+4.3
1,697,640	-		LU632_RS09005	0.12	+0.5
1,697,640	-		LU632_RS09005	0.12	-0.0
1,697,642	+		LU632_RS09005	0.12	-2.5
1,697,643	-		LU632_RS09005	0.12	+0.6
1,697,643	-		LU632_RS09005	0.12	-0.1
1,697,813	-		LU632_RS09005	0.28	+1.4
1,697,974	-		LU632_RS09005	0.44	+1.8
1,698,175	+		LU632_RS09005	0.63	-1.0
1,698,314	+		LU632_RS09005	0.76	+0.4
1,698,314	+		LU632_RS09005	0.76	-0.9
1,698,315	-		LU632_RS09005	0.77	+0.7
1,698,383	+		LU632_RS09005	0.83	-0.6
1,698,384	-		LU632_RS09005	0.83	+0.7