Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS08620

Experiment: Experiment:PE, population C11, passage 1 (PE-S-C11-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:PE, population C11, passage 1 (PE-S-C11-P1)
1,615,397	+		LU632_RS08610	0.40	-0.6
1,615,398	-		LU632_RS08610	0.41	+0.4
1,615,398	-		LU632_RS08610	0.41	-1.7
1,615,399	-		LU632_RS08610	0.41	+0.5
1,615,402	+		LU632_RS08610	0.41	+2.9
1,615,403	-		LU632_RS08610	0.41	+1.2
1,615,462	+		LU632_RS08610	0.50	+0.5
1,615,604	+		LU632_RS08610	0.71	+0.9
1,615,604	+		LU632_RS08610	0.71	-1.0
1,615,604	+		LU632_RS08610	0.71	-1.4
1,615,605	-		LU632_RS08610	0.71	+0.6
1,615,605	-		LU632_RS08610	0.71	+0.6
1,615,631	+		LU632_RS08610	0.75	+1.2
1,615,631	+		LU632_RS08610	0.75	+1.2
1,615,632	-		LU632_RS08610	0.75	+2.2
1,615,763	+				+0.6
1,615,763	+				-0.1
1,615,795	-				-1.8
1,615,800	+				+1.3
1,615,802	+				+2.1
1,615,807	-				+0.7
1,615,895	-		LU632_RS08615	0.28	-1.9
1,615,895	-		LU632_RS08615	0.28	+0.0
1,615,916	+		LU632_RS08615	0.34	+0.5
1,615,922	+		LU632_RS08615	0.36	+0.4
1,615,998	+		LU632_RS08615	0.59	-1.2
1,616,022	+		LU632_RS08615	0.66	+1.0
1,616,043	-		LU632_RS08615	0.73	+1.7
1,616,088	-		LU632_RS08615	0.87	+0.4
1,616,088	-		LU632_RS08615	0.87	-1.1
1,616,088	-		LU632_RS08615	0.87	-1.5
1,616,132	-				+0.3
1,616,132	-				-1.5
1,616,178	+				+1.6
1,616,179	-				-0.6
1,616,213	-				-0.3
1,616,233	-				-1.8
1,616,250	+				-0.8
1,616,255	-				+0.4
1,616,359	+				+1.8
1,616,359	+				+1.7
1,616,359	+				+0.1
1,616,388	-				-0.7
1,616,388	-				+0.8
1,616,388	-				-1.5
1,616,388	-				-1.2
1,616,461	-		LU632_RS08620	0.22	-1.2
1,616,461	-		LU632_RS08620	0.22	-1.6
1,616,475	-		LU632_RS08620	0.27	+0.7
1,616,631	+		LU632_RS08620	0.76	-0.0
1,616,631	+		LU632_RS08620	0.76	-1.8
1,617,337	+				+0.5
1,617,360	+				+1.4
1,617,370	+				+0.8
1,617,452	-		LU632_RS08630	0.30	+1.3
1,617,648	-		LU632_RS08630	0.79	+0.2
1,617,674	-		LU632_RS08630	0.86	+1.8
1,617,674	-		LU632_RS08630	0.86	-0.8
1,617,677	-		LU632_RS08630	0.87	+0.2