Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS06775

Experiment: Experiment:PE, population C11, passage 1 (PE-S-C11-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:PE, population C11, passage 1 (PE-S-C11-P1)
1,300,449	+				+0.0
1,300,452	+				+0.3
1,300,453	-				+1.7
1,300,453	-				+1.0
1,300,457	+				-0.8
1,300,524	-				-0.4
1,300,538	-				-0.8
1,300,565	+		LU632_RS06765	0.18	+0.8
1,300,631	+		LU632_RS06765	0.50	-1.2
1,300,644	+		LU632_RS06765	0.56	-2.4
1,300,645	-		LU632_RS06765	0.56	+0.4
1,300,654	+		LU632_RS06765	0.60	+0.5
1,300,654	+		LU632_RS06765	0.60	-1.4
1,300,713	+		LU632_RS06765	0.89	+1.2
1,300,772	+				-2.3
1,300,772	+				-0.8
1,300,776	-				-0.6
1,300,825	+				-1.3
1,300,844	-				+0.0
1,300,906	+		LU632_RS06770	0.19	+0.5
1,300,943	-		LU632_RS06770	0.31	-1.3
1,300,979	+		LU632_RS06770	0.42	+0.2
1,300,979	+		LU632_RS06770	0.42	-1.2
1,300,979	+		LU632_RS06770	0.42	-0.3
1,300,986	+		LU632_RS06770	0.44	+2.3
1,301,103	+		LU632_RS06770	0.80	-0.0
1,301,104	-		LU632_RS06770	0.81	+0.5
1,301,104	-		LU632_RS06770	0.81	-0.8
1,301,104	-		LU632_RS06770	0.81	+1.5
1,301,104	-		LU632_RS06770	0.81	+0.8
1,301,139	+				+1.0
1,301,145	+				+0.2
1,301,199	+				+1.0
1,301,236	-				-2.4
1,301,273	+				-0.2
1,301,273	+				-3.0
1,301,274	-				+2.1
1,301,278	-				-1.1
1,301,326	+		LU632_RS06775	0.14	-1.0
1,301,375	-		LU632_RS06775	0.34	-0.0
1,301,468	+		LU632_RS06775	0.72	-0.3
1,301,469	-		LU632_RS06775	0.73	-0.7
1,301,508	+		LU632_RS06775	0.89	-2.3
1,301,596	-				-2.2
1,301,644	-				+0.2
1,301,687	-				-1.2
1,301,701	+				-0.4
1,301,701	+				+0.6
1,301,717	-				+0.2
1,301,719	+				+0.6
1,301,720	-				-2.9
1,301,720	-				+0.4
1,301,802	-				-0.1