Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS06480

Experiment: Experiment:PE, population C11, passage 1 (PE-S-C11-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:PE, population C11, passage 1 (PE-S-C11-P1)
1,245,486	+				+2.8
1,245,486	+				+4.4
1,245,487	-				+3.0
1,245,523	+				+4.0
1,245,524	-				+4.0
1,245,541	-				+4.0
1,245,547	-				+2.2
1,245,555	+				+4.0
1,245,642	+	rpoS	LU632_RS06480	0.12	-0.5
1,245,784	+	rpoS	LU632_RS06480	0.26	+4.0
1,245,814	+	rpoS	LU632_RS06480	0.29	+3.9
1,245,814	+	rpoS	LU632_RS06480	0.29	+3.9
1,245,815	-	rpoS	LU632_RS06480	0.29	+4.1
1,245,820	-	rpoS	LU632_RS06480	0.30	+2.3
1,245,956	+	rpoS	LU632_RS06480	0.43	+3.9
1,245,982	+	rpoS	LU632_RS06480	0.46	-0.6
1,245,994	+	rpoS	LU632_RS06480	0.47	+3.6
1,245,994	+	rpoS	LU632_RS06480	0.47	+4.0
1,245,995	-	rpoS	LU632_RS06480	0.47	+3.6
1,246,034	-	rpoS	LU632_RS06480	0.51	+4.5
1,246,039	+	rpoS	LU632_RS06480	0.52	+4.2
1,246,059	+	rpoS	LU632_RS06480	0.54	+3.8
1,246,059	+	rpoS	LU632_RS06480	0.54	+4.3
1,246,089	+	rpoS	LU632_RS06480	0.57	+5.7
1,246,169	-	rpoS	LU632_RS06480	0.65	+5.1
1,246,288	+	rpoS	LU632_RS06480	0.77	+4.7
1,246,288	+	rpoS	LU632_RS06480	0.77	+3.5
1,246,289	-	rpoS	LU632_RS06480	0.77	+4.6
1,246,300	+	rpoS	LU632_RS06480	0.78	+5.0
1,246,300	+	rpoS	LU632_RS06480	0.78	+4.5
1,246,368	+	rpoS	LU632_RS06480	0.85	+2.7
1,246,389	+	rpoS	LU632_RS06480	0.87	+4.7
1,246,389	+	rpoS	LU632_RS06480	0.87	+3.4
1,246,390	-	rpoS	LU632_RS06480	0.87	+5.2
1,246,523	+				+1.1
1,246,524	-				-0.1
1,246,625	+				-3.4
1,246,693	+				+0.1
1,246,707	+				-0.5
1,246,707	+				-1.0
1,246,711	+				-2.3
1,246,740	+				+1.1
1,246,741	-				-0.3
1,246,741	-				-0.1
1,246,792	+				+0.5
1,246,821	+				+0.4
1,246,822	-				-0.5
1,246,822	-				-0.7
1,246,826	+				+0.9
1,246,849	+				+1.8
1,246,970	+				+0.6
1,246,970	+				-0.2
1,246,993	+				-1.2
1,247,058	+				+1.5
1,247,058	+				+3.0
1,247,058	+				-1.0
1,247,059	-				-0.1
1,247,059	-				-1.3
1,247,059	-				-1.8
1,247,060	+				-2.2
1,247,060	+				+0.2
1,247,060	+				-0.7
1,247,060	+				-1.9
1,247,061	-				-0.4
1,247,061	-				+0.3
1,247,061	-				-0.1
1,247,061	-				-0.6
1,247,061	-				+2.2
1,247,061	-				-1.7
1,247,176	-				-1.1
1,247,178	+				-0.3
1,247,179	-				+2.0
1,247,184	-				+0.0
1,247,400	+				-0.4
1,247,400	+				+1.7
1,247,401	-				+0.0
1,247,506	-				-0.3
1,247,511	+				+0.5