Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS05925

Experiment: Experiment:PE, population C11, passage 1 (PE-S-C11-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:PE, population C11, passage 1 (PE-S-C11-P1)
1,124,244	+				-0.1
1,124,245	-				-1.5
1,124,245	-				-0.9
1,124,306	+				+0.2
1,124,374	+				-1.4
1,124,375	-				+0.3
1,124,375	-				+1.3
1,124,415	+				-1.5
1,124,416	-				-0.4
1,124,416	-				+1.0
1,124,416	-				-1.3
1,124,419	+				+1.1
1,124,529	-				+0.1
1,124,556	-				+1.2
1,124,564	+				+0.2
1,124,568	+				-0.1
1,124,635	-				+0.1
1,124,717	+				-1.4
1,124,717	+				+0.5
1,124,717	+				-0.2
1,124,717	+				-0.7
1,124,718	-				+2.9
1,124,813	+		LU632_RS05920	0.12	-2.4
1,124,813	+		LU632_RS05920	0.12	+0.1
1,124,852	-		LU632_RS05920	0.25	+0.5
1,124,852	-		LU632_RS05920	0.25	-0.9
1,124,967	-		LU632_RS05920	0.65	+1.7
1,125,030	-		LU632_RS05920	0.87	-0.9
1,125,030	-		LU632_RS05920	0.87	-1.1
1,125,042	-				-0.0
1,125,122	+				-0.3
1,125,122	+				-0.6
1,125,123	-				+0.5
1,125,123	-				+0.8
1,125,182	-				-0.1
1,125,204	-				+1.0
1,125,279	-		LU632_RS05925	0.69	-0.4
1,125,295	-		LU632_RS05925	0.84	-2.0
1,125,328	-				-0.8
1,125,335	+				-1.0
1,125,357	-				-0.7
1,125,357	-				-0.5
1,125,370	+				-1.8
1,125,370	+				-0.9
1,125,370	+				+1.5
1,125,370	+				+1.1
1,125,371	-				+0.6
1,125,371	-				-0.0
1,125,371	-				+1.2
1,125,371	-				+1.5
1,125,395	-				+3.1
1,125,490	-				+1.3
1,125,534	+				+0.2
1,125,534	+				-0.3
1,125,535	-				+0.6
1,125,621	+				+1.5
1,125,623	+				-1.1
1,125,786	-		LU632_RS05930	0.14	+0.7
1,125,947	+		LU632_RS05930	0.25	+0.5
1,125,948	-		LU632_RS05930	0.25	+1.0
1,126,079	+		LU632_RS05930	0.34	+2.0
1,126,079	+		LU632_RS05930	0.34	-1.2
1,126,080	-		LU632_RS05930	0.34	+0.4
1,126,082	+		LU632_RS05930	0.34	+1.5
1,126,082	+		LU632_RS05930	0.34	+0.3
1,126,087	+		LU632_RS05930	0.35	-2.1
1,126,088	-		LU632_RS05930	0.35	+0.7
1,126,095	+		LU632_RS05930	0.35	+2.3
1,126,096	-		LU632_RS05930	0.35	-3.1
1,126,096	-		LU632_RS05930	0.35	+0.2
1,126,097	+		LU632_RS05930	0.35	-0.9
1,126,098	-		LU632_RS05930	0.36	+0.6
1,126,185	-		LU632_RS05930	0.42	-0.8
1,126,185	-		LU632_RS05930	0.42	+0.0
1,126,193	+		LU632_RS05930	0.42	+0.0
1,126,194	-		LU632_RS05930	0.42	-0.1
1,126,194	-		LU632_RS05930	0.42	-1.6
1,126,194	-		LU632_RS05930	0.42	+2.7
1,126,194	-		LU632_RS05930	0.42	+0.6
1,126,227	-		LU632_RS05930	0.45	+0.1