Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS00505

Experiment: Experiment:PE, population C11, passage 1 (PE-S-C11-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:PE, population C11, passage 1 (PE-S-C11-P1)
101,750	-	sctS	LU632_RS00495	0.38	+1.7
101,905	-				-1.9
101,905	-				-0.8
101,938	-				-0.7
101,955	-				+0.2
102,007	+	sctT	LU632_RS00500	0.12	-2.3
102,010	+	sctT	LU632_RS00500	0.12	-0.4
102,050	-	sctT	LU632_RS00500	0.17	+1.8
102,110	+	sctT	LU632_RS00500	0.25	+2.1
102,345	-	sctT	LU632_RS00500	0.56	+1.6
102,348	+	sctT	LU632_RS00500	0.56	+2.4
102,349	-	sctT	LU632_RS00500	0.56	+1.6
102,349	-	sctT	LU632_RS00500	0.56	+1.1
102,352	+	sctT	LU632_RS00500	0.57	-0.9
102,465	-	sctT	LU632_RS00500	0.71	+1.5
102,465	-	sctT	LU632_RS00500	0.71	+1.6
102,467	-	sctT	LU632_RS00500	0.72	+1.0
103,541	+		LU632_RS00505	0.78	-1.2
103,695	-				+2.8
103,695	-				-2.2
103,789	+				+2.1
103,814	-				+0.5
103,840	-				+0.1
104,062	+	sicA	LU632_RS00510	0.27	+1.1
104,213	+	sicA	LU632_RS00510	0.55	-0.6
104,308	-	sicA	LU632_RS00510	0.72	+0.9
104,353	+	sicA	LU632_RS00510	0.81	+0.8
104,636	+				-3.1