Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS00175

Experiment: Experiment:PE, population C11, passage 1 (PE-S-C11-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:PE, population C11, passage 1 (PE-S-C11-P1)
32,012	+				-0.2
32,013	-				-1.4
32,018	+				-0.2
32,018	+				+1.2
32,028	+				+2.5
32,029	-				+0.6
32,029	-				-1.4
32,036	+				+0.1
32,036	+				+2.1
32,037	-				-0.2
32,037	-				-1.0
32,037	-				-1.9
32,037	-				-2.0
32,040	+				+1.4
32,041	-				-1.3
32,041	-				-2.4
32,068	+				+0.2
32,068	+				-0.2
32,203	+		LU632_RS00170	0.25	+0.1
32,203	+		LU632_RS00170	0.25	+1.3
32,204	-		LU632_RS00170	0.25	+1.1
32,206	+		LU632_RS00170	0.25	-0.4
32,206	+		LU632_RS00170	0.25	+1.1
32,206	+		LU632_RS00170	0.25	-3.5
32,207	-		LU632_RS00170	0.25	-0.5
32,207	-		LU632_RS00170	0.25	-2.8
32,207	-		LU632_RS00170	0.25	+1.5
32,207	-		LU632_RS00170	0.25	-0.1
32,209	-		LU632_RS00170	0.26	+0.1
32,296	-		LU632_RS00170	0.41	-2.1
32,300	-		LU632_RS00170	0.41	-1.6
32,300	-		LU632_RS00170	0.41	+1.4
32,300	-		LU632_RS00170	0.41	+0.8
32,368	+		LU632_RS00170	0.53	+0.8
32,371	+		LU632_RS00170	0.53	-3.4
32,371	+		LU632_RS00170	0.53	+1.6
32,400	+		LU632_RS00170	0.58	-0.4
32,485	+		LU632_RS00170	0.73	-1.1
32,497	+		LU632_RS00170	0.75	-0.8
32,507	+		LU632_RS00170	0.77	+0.3
32,507	+		LU632_RS00170	0.77	-1.5
32,507	+		LU632_RS00170	0.77	-0.5
32,508	-		LU632_RS00170	0.77	+0.8
32,575	+		LU632_RS00170	0.88	+2.0
32,587	+				-1.3
32,597	-				-1.6
32,598	+				-0.1
32,598	+				-0.8
32,598	+				-3.1
32,598	+				+0.6
32,598	+				+1.8
32,599	-				-2.9
32,599	-				+1.1
32,599	-				-1.2
32,599	-				-0.7
32,599	-				+0.7
32,599	-				-1.7
32,603	-				+0.4
32,621	+				+1.4
33,300	+				-1.5
33,301	-				-1.9
33,332	+				+0.4
33,365	+				-1.6
33,394	+				+0.2
33,402	-				-0.4
33,568	+				+1.0
33,569	-				+2.1
33,571	+				+0.8
33,571	+				-2.5
33,647	+		LU632_RS00180	0.11	-0.5
33,647	+		LU632_RS00180	0.11	-3.5
33,652	+		LU632_RS00180	0.11	-0.5
33,653	-		LU632_RS00180	0.12	-1.5
33,698	+		LU632_RS00180	0.18	+1.5
33,699	-		LU632_RS00180	0.18	+2.0
33,705	+		LU632_RS00180	0.19	+0.7
33,745	-		LU632_RS00180	0.24	-0.0
33,822	-		LU632_RS00180	0.35	+0.0
33,824	-		LU632_RS00180	0.35	-1.3
33,971	-		LU632_RS00180	0.56	+0.2
33,996	+		LU632_RS00180	0.59	+1.3
33,997	-		LU632_RS00180	0.60	+0.7
34,060	+		LU632_RS00180	0.68	+1.8
34,072	+		LU632_RS00180	0.70	+3.6
34,073	-		LU632_RS00180	0.70	+0.5
34,084	+		LU632_RS00180	0.72	-0.7
34,152	-		LU632_RS00180	0.81	+0.1