Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS20675

Experiment: Glycogen; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycogen; filtered 2.5 mg/ml (C)
5,097,072	-		ABI39_RS20670	0.16	+1.0
5,097,077	+		ABI39_RS20670	0.16	+0.4
5,097,077	+		ABI39_RS20670	0.16	-0.6
5,097,078	-		ABI39_RS20670	0.16	-0.4
5,097,237	-		ABI39_RS20670	0.31	+0.2
5,097,410	+		ABI39_RS20670	0.47	+0.4
5,097,411	-		ABI39_RS20670	0.47	-0.4
5,097,506	-		ABI39_RS20670	0.56	-0.1
5,097,796	+		ABI39_RS20670	0.83	+0.1
5,097,982	+				+0.1
5,097,999	+				-0.2
5,098,016	-				+1.3
5,098,078	+				+0.5
5,098,312	-		ABI39_RS20675	0.16	+0.6
5,098,314	+		ABI39_RS20675	0.16	+0.2
5,098,315	-		ABI39_RS20675	0.16	+0.8
5,098,403	-		ABI39_RS20675	0.21	+0.2
5,098,479	-		ABI39_RS20675	0.25	-0.1
5,098,497	-		ABI39_RS20675	0.26	+1.1
5,098,524	-		ABI39_RS20675	0.28	+0.5
5,098,562	-		ABI39_RS20675	0.30	+1.4
5,098,565	+		ABI39_RS20675	0.30	+1.0
5,098,574	-		ABI39_RS20675	0.30	+0.4
5,098,820	+		ABI39_RS20675	0.43	+1.1
5,098,820	+		ABI39_RS20675	0.43	+0.7
5,098,835	-		ABI39_RS20675	0.44	+0.7
5,098,898	+		ABI39_RS20675	0.47	+0.4
5,099,354	+		ABI39_RS20675	0.72	+0.9
5,099,360	-		ABI39_RS20675	0.72	+1.7
5,099,501	-		ABI39_RS20675	0.79	+1.3
5,099,548	+		ABI39_RS20675	0.82	+0.3
5,099,548	+		ABI39_RS20675	0.82	-0.3
5,099,691	-		ABI39_RS20675	0.89	+0.4
5,099,692	+		ABI39_RS20675	0.90	+0.0
5,099,779	+				-0.2
5,099,911	+				+0.6
5,100,138	+				+0.6
5,100,138	+				-0.2
5,100,159	+				+0.1
5,100,160	-				+0.8
5,100,324	-		ABI39_RS20680	0.14	+1.1
5,100,324	-		ABI39_RS20680	0.14	+0.5
5,100,410	+		ABI39_RS20680	0.19	+0.0
5,100,412	+		ABI39_RS20680	0.19	-0.2
5,100,413	-		ABI39_RS20680	0.19	+0.1
5,100,413	-		ABI39_RS20680	0.19	+0.9
5,100,497	-		ABI39_RS20680	0.24	-0.6
5,100,507	-		ABI39_RS20680	0.24	+1.0
5,100,660	+		ABI39_RS20680	0.33	+0.7
5,100,716	+		ABI39_RS20680	0.36	+0.5
5,100,716	+		ABI39_RS20680	0.36	-0.1
5,100,768	+		ABI39_RS20680	0.39	-0.0
5,100,769	-		ABI39_RS20680	0.39	-0.1
5,100,780	-		ABI39_RS20680	0.39	-0.7
5,100,852	+		ABI39_RS20680	0.43	+0.9
5,100,852	+		ABI39_RS20680	0.43	+0.8