Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS17835

Experiment: Glycogen; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycogen; filtered 2.5 mg/ml (C)
4,495,679	-		ABI39_RS17820	0.82	-0.8
4,495,842	-				+0.2
4,495,846	+				-0.6
4,495,909	-				-1.5
4,495,913	-				-1.5
4,495,980	-				-1.2
4,496,031	-				-0.5
4,496,136	-				+0.1
4,496,202	-				+0.5
4,496,224	-				-0.7
4,496,332	-				-0.4
4,496,344	-				+0.2
4,496,346	+				-0.0
4,496,346	+				+0.1
4,496,357	-				+0.2
4,496,367	+				+0.8
4,496,401	+		ABI39_RS17830	0.13	-0.8
4,496,447	-		ABI39_RS17830	0.29	-0.1
4,496,447	-		ABI39_RS17830	0.29	+0.4
4,496,447	-		ABI39_RS17830	0.29	+0.7
4,496,545	+		ABI39_RS17830	0.63	+0.1
4,496,580	+		ABI39_RS17830	0.75	-3.2
4,496,699	-				+0.6
4,496,699	-				+0.7
4,496,767	-		ABI39_RS17835	0.16	-1.2
4,496,851	-		ABI39_RS17835	0.27	-0.2
4,496,877	-		ABI39_RS17835	0.31	-0.9
4,496,916	-		ABI39_RS17835	0.36	+0.1
4,496,921	+		ABI39_RS17835	0.37	-0.7
4,496,928	-		ABI39_RS17835	0.38	+0.0
4,496,951	+		ABI39_RS17835	0.41	-0.3
4,496,983	+		ABI39_RS17835	0.45	-0.1
4,497,018	-		ABI39_RS17835	0.50	+0.7
4,497,030	+		ABI39_RS17835	0.51	+0.6
4,497,034	+		ABI39_RS17835	0.52	+0.8
4,497,062	-		ABI39_RS17835	0.56	+0.2
4,497,143	+		ABI39_RS17835	0.66	-0.3
4,497,182	+		ABI39_RS17835	0.72	+0.1
4,497,182	+		ABI39_RS17835	0.72	-0.1
4,497,183	-		ABI39_RS17835	0.72	-1.7
4,497,185	-		ABI39_RS17835	0.72	-1.6
4,497,193	+		ABI39_RS17835	0.73	-0.1
4,497,194	-		ABI39_RS17835	0.73	+0.1
4,497,197	+		ABI39_RS17835	0.74	+1.0
4,497,198	-		ABI39_RS17835	0.74	-0.0
4,497,287	+		ABI39_RS17835	0.86	+0.3
4,497,287	+		ABI39_RS17835	0.86	+1.0
4,497,396	-				+0.5
4,497,396	-				-0.4
4,497,398	-				+0.1
4,497,483	+				-0.3
4,497,486	-				-0.8
4,497,586	-				-0.4
4,497,615	-				+0.4
4,497,701	+				-0.3
4,497,770	+				+0.2
4,497,815	-				+0.7
4,498,012	-				+1.9
4,498,113	+		ABI39_RS17845	0.11	+1.4
4,498,117	+		ABI39_RS17845	0.11	+1.3
4,498,202	+		ABI39_RS17845	0.19	+2.2
4,498,211	-		ABI39_RS17845	0.20	+1.2
4,498,253	+		ABI39_RS17845	0.24	+1.1
4,498,280	+		ABI39_RS17845	0.26	+1.8
4,498,283	+		ABI39_RS17845	0.26	+1.0