Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS11465

Experiment: Glycogen; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycogen; filtered 2.5 mg/ml (C)
3,048,936	+		ABI39_RS11460	0.68	-0.1
3,049,063	-		ABI39_RS11460	0.74	+0.4
3,049,132	-		ABI39_RS11460	0.77	+0.2
3,049,167	-		ABI39_RS11460	0.79	-0.1
3,049,184	+		ABI39_RS11460	0.79	+0.1
3,049,185	-		ABI39_RS11460	0.79	+0.0
3,049,186	+		ABI39_RS11460	0.80	+0.2
3,049,186	+		ABI39_RS11460	0.80	-0.4
3,049,199	-		ABI39_RS11460	0.80	-0.2
3,049,315	+		ABI39_RS11460	0.85	+0.5
3,049,462	-				+0.2
3,049,510	+				+0.2
3,049,627	+				+0.2
3,049,652	+				+0.3
3,049,698	+				+0.1
3,049,723	+				-0.5
3,049,724	-				-0.4
3,049,773	+				+0.2
3,049,793	+				-0.7
3,049,906	-				+0.2
3,050,191	+		ABI39_RS11465	0.15	+0.4
3,050,243	-		ABI39_RS11465	0.18	+0.2
3,050,428	+		ABI39_RS11465	0.28	-0.2
3,050,442	-		ABI39_RS11465	0.29	+0.3
3,050,512	-		ABI39_RS11465	0.32	+0.2
3,050,556	-		ABI39_RS11465	0.35	+0.5
3,050,570	-		ABI39_RS11465	0.35	+1.0
3,050,625	+		ABI39_RS11465	0.38	-0.6
3,050,626	-		ABI39_RS11465	0.38	+0.1
3,050,626	-		ABI39_RS11465	0.38	+1.6
3,050,626	-		ABI39_RS11465	0.38	+0.6
3,050,819	-		ABI39_RS11465	0.49	+0.0
3,050,847	+		ABI39_RS11465	0.50	+1.1
3,050,847	+		ABI39_RS11465	0.50	+3.6
3,050,869	+		ABI39_RS11465	0.51	+0.4
3,050,979	+		ABI39_RS11465	0.57	+0.1
3,051,126	+		ABI39_RS11465	0.65	+0.4
3,051,354	-		ABI39_RS11465	0.77	+0.8
3,051,355	+		ABI39_RS11465	0.77	+0.3
3,051,355	+		ABI39_RS11465	0.77	+0.3
3,051,459	+		ABI39_RS11465	0.83	-0.7
3,051,612	-				+0.3
3,051,675	-				+0.1
3,051,675	-				+0.1
3,051,678	+				+0.1
3,051,815	+				+0.5
3,051,821	-				+0.4
3,051,824	+				+0.3
3,051,869	+		ABI39_RS11470	0.14	-1.4
3,051,912	+		ABI39_RS11470	0.28	+0.4
3,051,913	-		ABI39_RS11470	0.28	+0.8
3,051,922	+		ABI39_RS11470	0.31	+0.2
3,051,922	+		ABI39_RS11470	0.31	-0.1
3,051,922	+		ABI39_RS11470	0.31	-0.2
3,051,955	-		ABI39_RS11470	0.42	-0.2
3,052,130	-				+0.2
3,052,132	-				+0.4
3,052,136	+				+0.6
3,052,136	+				+1.3
3,052,137	-				+0.1
3,052,141	-				+0.1
3,052,201	+				+0.2
3,052,315	+				-0.1
3,052,332	-				-1.3
3,052,332	-				-0.4
3,052,335	+				+0.1
3,052,361	+				+1.1
3,052,376	+				+0.5
3,052,437	-				+0.2
3,052,488	-				-0.1
3,052,490	-				+0.6
3,052,533	-		ABI39_RS11475	0.11	+0.2
3,052,581	+		ABI39_RS11475	0.12	+0.1
3,052,588	+		ABI39_RS11475	0.12	+0.3
3,052,589	-		ABI39_RS11475	0.12	+0.6
3,052,590	+		ABI39_RS11475	0.13	-0.0
3,052,591	-		ABI39_RS11475	0.13	-0.0
3,052,593	-		ABI39_RS11475	0.13	-2.2