Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS03855

Experiment: Glycogen; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycogen; filtered 2.5 mg/ml (C)
1,074,265	-		ABI39_RS03845	0.78	+0.3
1,074,307	+		ABI39_RS03845	0.80	+0.2
1,074,307	+		ABI39_RS03845	0.80	+0.5
1,074,353	-		ABI39_RS03845	0.83	+0.5
1,074,393	+		ABI39_RS03845	0.85	+0.5
1,074,393	+		ABI39_RS03845	0.85	-0.1
1,074,393	+		ABI39_RS03845	0.85	+1.0
1,074,394	-		ABI39_RS03845	0.85	-1.5
1,074,394	-		ABI39_RS03845	0.85	+0.4
1,074,396	-		ABI39_RS03845	0.85	+1.4
1,074,436	+		ABI39_RS03845	0.87	-0.3
1,074,472	-		ABI39_RS03845	0.89	-0.0
1,074,491	+				+1.0
1,074,530	+				-0.4
1,074,550	+				-0.9
1,074,551	-				+1.0
1,074,637	+				+0.8
1,074,637	+				+0.7
1,074,678	-				+0.9
1,074,743	+		ABI39_RS03850	0.14	+0.2
1,074,744	-		ABI39_RS03850	0.14	-0.4
1,074,860	-		ABI39_RS03850	0.36	+0.1
1,074,871	+		ABI39_RS03850	0.38	-0.0
1,074,920	+		ABI39_RS03850	0.48	+0.2
1,074,920	+		ABI39_RS03850	0.48	-0.0
1,074,932	-		ABI39_RS03850	0.50	+0.5
1,075,013	+		ABI39_RS03850	0.66	-0.4
1,075,019	-		ABI39_RS03850	0.67	-0.3
1,075,037	-		ABI39_RS03850	0.70	-0.0
1,075,157	-				-0.7
1,075,162	-				+0.3
1,075,198	-				-0.3
1,075,317	-		ABI39_RS03855	0.16	-0.4
1,075,381	-		ABI39_RS03855	0.29	+0.8
1,075,385	+		ABI39_RS03855	0.30	+0.9
1,075,469	+		ABI39_RS03855	0.47	+0.8
1,075,508	-		ABI39_RS03855	0.55	+0.9
1,075,526	+		ABI39_RS03855	0.58	+0.0
1,075,536	-		ABI39_RS03855	0.60	+0.5
1,075,628	+		ABI39_RS03855	0.79	+0.1
1,075,699	+				+0.2
1,075,719	+				+0.3
1,075,720	-				-0.0
1,075,808	+				+0.1
1,075,834	+				+0.1
1,075,861	+				+0.0
1,076,045	-		ABI39_RS21670	0.21	+0.7
1,076,171	+		ABI39_RS21670	0.34	+0.6
1,076,185	-		ABI39_RS21670	0.36	-0.7
1,076,284	+		ABI39_RS21670	0.46	+0.3
1,076,290	+		ABI39_RS21670	0.46	+1.1
1,076,305	-		ABI39_RS21670	0.48	+0.2
1,076,311	+		ABI39_RS21670	0.49	-0.5
1,076,311	+		ABI39_RS21670	0.49	-0.5
1,076,311	+		ABI39_RS21670	0.49	+1.1
1,076,312	-		ABI39_RS21670	0.49	-0.4
1,076,393	-		ABI39_RS21670	0.57	+0.1
1,076,460	-		ABI39_RS21670	0.64	-0.8
1,076,557	-		ABI39_RS21670	0.74	+0.6
1,076,589	-		ABI39_RS21670	0.78	-1.0
1,076,606	-		ABI39_RS21670	0.80	-1.2
1,076,635	-		ABI39_RS21670	0.83	+0.5
1,076,643	-		ABI39_RS21670	0.83	-0.6
1,076,647	+		ABI39_RS21670	0.84	+0.8
1,076,647	+		ABI39_RS21670	0.84	+0.2
1,076,652	-		ABI39_RS21670	0.84	+0.2