Experiment: Glycogen; autoclaved 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABI39_RS21310 and ABI39_RS21315 are separated by 26 nucleotides ABI39_RS21315 and ABI39_RS21320 overlap by 4 nucleotides ABI39_RS21320 and ABI39_RS21325 are separated by 1 nucleotides
ABI39_RS21310: ABI39_RS21310 - glycoside hydrolase family 2 protein, at 5,252,758 to 5,255,325
_RS21310
ABI39_RS21315: ABI39_RS21315 - sialate O-acetylesterase, at 5,255,352 to 5,257,415
_RS21315
ABI39_RS21320: ABI39_RS21320 - sialate O-acetylesterase, at 5,257,412 to 5,258,077
_RS21320
ABI39_RS21325: ABI39_RS21325 - family 20 glycosylhydrolase, at 5,258,079 to 5,260,085
_RS21325
Position (kb) 5255
5256
5257
5258 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5254.387 kb on - strand, within ABI39_RS21310 at 5254.399 kb on + strand, within ABI39_RS21310 at 5254.454 kb on - strand, within ABI39_RS21310 at 5254.550 kb on + strand, within ABI39_RS21310 at 5254.556 kb on + strand, within ABI39_RS21310 at 5254.657 kb on + strand, within ABI39_RS21310 at 5254.661 kb on + strand, within ABI39_RS21310 at 5254.662 kb on - strand, within ABI39_RS21310 at 5254.945 kb on - strand, within ABI39_RS21310 at 5254.954 kb on - strand, within ABI39_RS21310 at 5254.954 kb on - strand, within ABI39_RS21310 at 5254.983 kb on + strand, within ABI39_RS21310 at 5254.991 kb on + strand, within ABI39_RS21310 at 5255.055 kb on + strand, within ABI39_RS21310 at 5255.055 kb on + strand, within ABI39_RS21310 at 5255.056 kb on - strand, within ABI39_RS21310 at 5255.062 kb on - strand, within ABI39_RS21310 at 5255.068 kb on - strand, within ABI39_RS21310 at 5255.139 kb on + strand at 5255.143 kb on - strand at 5255.165 kb on - strand at 5255.294 kb on - strand at 5255.328 kb on + strand at 5255.347 kb on - strand at 5255.395 kb on - strand at 5255.512 kb on - strand at 5255.540 kb on + strand at 5255.594 kb on + strand, within ABI39_RS21315 at 5255.597 kb on - strand, within ABI39_RS21315 at 5256.016 kb on + strand, within ABI39_RS21315 at 5256.161 kb on + strand, within ABI39_RS21315 at 5256.260 kb on - strand, within ABI39_RS21315 at 5256.569 kb on + strand, within ABI39_RS21315 at 5256.787 kb on + strand, within ABI39_RS21315 at 5256.788 kb on - strand, within ABI39_RS21315 at 5256.788 kb on - strand, within ABI39_RS21315 at 5256.864 kb on + strand, within ABI39_RS21315 at 5256.865 kb on - strand, within ABI39_RS21315 at 5257.135 kb on - strand, within ABI39_RS21315 at 5257.241 kb on + strand at 5257.308 kb on + strand at 5257.333 kb on - strand at 5257.390 kb on - strand at 5257.398 kb on + strand at 5257.489 kb on + strand, within ABI39_RS21320 at 5257.492 kb on + strand, within ABI39_RS21320 at 5257.495 kb on - strand, within ABI39_RS21320 at 5257.496 kb on + strand, within ABI39_RS21320 at 5257.497 kb on - strand, within ABI39_RS21320 at 5257.552 kb on - strand, within ABI39_RS21320 at 5257.625 kb on - strand, within ABI39_RS21320 at 5257.625 kb on - strand, within ABI39_RS21320 at 5257.836 kb on + strand, within ABI39_RS21320 at 5257.837 kb on - strand, within ABI39_RS21320 at 5257.946 kb on - strand, within ABI39_RS21320 at 5257.995 kb on + strand, within ABI39_RS21320 at 5258.007 kb on + strand, within ABI39_RS21320 at 5258.008 kb on - strand, within ABI39_RS21320 at 5258.061 kb on - strand at 5258.081 kb on - strand at 5258.102 kb on - strand at 5258.290 kb on - strand, within ABI39_RS21325 at 5258.375 kb on - strand, within ABI39_RS21325
Per-strain Table
Position Strand Gene LocusTag Fraction Glycogen; autoclaved 2.5 mg/ml (C) remove 5,254,387 - ABI39_RS21310 0.63 +0.3 5,254,399 + ABI39_RS21310 0.64 +0.1 5,254,454 - ABI39_RS21310 0.66 +0.9 5,254,550 + ABI39_RS21310 0.70 -0.0 5,254,556 + ABI39_RS21310 0.70 -0.3 5,254,657 + ABI39_RS21310 0.74 +0.3 5,254,661 + ABI39_RS21310 0.74 -0.2 5,254,662 - ABI39_RS21310 0.74 -0.7 5,254,945 - ABI39_RS21310 0.85 +0.2 5,254,954 - ABI39_RS21310 0.86 +0.8 5,254,954 - ABI39_RS21310 0.86 -0.7 5,254,983 + ABI39_RS21310 0.87 +0.0 5,254,991 + ABI39_RS21310 0.87 +0.8 5,255,055 + ABI39_RS21310 0.89 +0.3 5,255,055 + ABI39_RS21310 0.89 -0.1 5,255,056 - ABI39_RS21310 0.89 -0.6 5,255,062 - ABI39_RS21310 0.90 -0.9 5,255,068 - ABI39_RS21310 0.90 -0.1 5,255,139 + +1.4 5,255,143 - +0.4 5,255,165 - -0.7 5,255,294 - +0.2 5,255,328 + -0.7 5,255,347 - -2.2 5,255,395 - -0.7 5,255,512 - -1.2 5,255,540 + -0.2 5,255,594 + ABI39_RS21315 0.12 +0.4 5,255,597 - ABI39_RS21315 0.12 -0.4 5,256,016 + ABI39_RS21315 0.32 -0.4 5,256,161 + ABI39_RS21315 0.39 -0.6 5,256,260 - ABI39_RS21315 0.44 -0.0 5,256,569 + ABI39_RS21315 0.59 +1.0 5,256,787 + ABI39_RS21315 0.70 -0.1 5,256,788 - ABI39_RS21315 0.70 -0.3 5,256,788 - ABI39_RS21315 0.70 -0.8 5,256,864 + ABI39_RS21315 0.73 -0.3 5,256,865 - ABI39_RS21315 0.73 -0.2 5,257,135 - ABI39_RS21315 0.86 -0.3 5,257,241 + +0.9 5,257,308 + +0.1 5,257,333 - -0.7 5,257,390 - -1.4 5,257,398 + -0.3 5,257,489 + ABI39_RS21320 0.12 +1.3 5,257,492 + ABI39_RS21320 0.12 -0.2 5,257,495 - ABI39_RS21320 0.12 -0.8 5,257,496 + ABI39_RS21320 0.13 -0.7 5,257,497 - ABI39_RS21320 0.13 -0.3 5,257,552 - ABI39_RS21320 0.21 -0.4 5,257,625 - ABI39_RS21320 0.32 +0.9 5,257,625 - ABI39_RS21320 0.32 -0.9 5,257,836 + ABI39_RS21320 0.64 +0.2 5,257,837 - ABI39_RS21320 0.64 -0.3 5,257,946 - ABI39_RS21320 0.80 -0.9 5,257,995 + ABI39_RS21320 0.88 -0.5 5,258,007 + ABI39_RS21320 0.89 +0.0 5,258,008 - ABI39_RS21320 0.89 -0.3 5,258,061 - -3.1 5,258,081 - -0.8 5,258,102 - +0.0 5,258,290 - ABI39_RS21325 0.11 -0.7 5,258,375 - ABI39_RS21325 0.15 -1.3
Or see this region's nucleotide sequence