Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS17555

Experiment: Glycogen; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycogen; autoclaved 2.5 mg/ml (C)
4,436,832	-		ABI39_RS17550	0.11	-2.9
4,436,864	-		ABI39_RS17550	0.14	+0.8
4,436,963	+		ABI39_RS17550	0.24	-0.6
4,436,967	-		ABI39_RS17550	0.25	+2.2
4,436,990	-		ABI39_RS17550	0.27	+0.7
4,437,021	+		ABI39_RS17550	0.30	-0.0
4,437,034	+		ABI39_RS17550	0.31	-0.9
4,437,112	-		ABI39_RS17550	0.39	-0.3
4,437,128	-		ABI39_RS17550	0.41	+1.8
4,437,146	-		ABI39_RS17550	0.42	+0.7
4,437,335	-		ABI39_RS17550	0.61	+0.6
4,437,398	+		ABI39_RS17550	0.67	+0.8
4,437,499	+		ABI39_RS17550	0.77	+0.9
4,437,517	+		ABI39_RS17550	0.79	-0.3
4,437,518	-		ABI39_RS17550	0.79	+1.4
4,437,688	+				+0.4
4,437,689	-				+0.4
4,437,752	-				+0.6
4,437,755	+				-1.0
4,437,784	+				-0.4
4,437,861	-				+0.8
4,437,861	-				+0.9
4,437,861	-				+0.8
4,437,879	-				+0.3
4,437,892	-				+1.4
4,437,912	+		ABI39_RS17555	0.12	+0.7
4,437,912	+		ABI39_RS17555	0.12	-0.0
4,437,915	-		ABI39_RS17555	0.12	+2.5
4,437,936	+		ABI39_RS17555	0.14	+0.4
4,437,936	+		ABI39_RS17555	0.14	+0.6
4,437,937	-		ABI39_RS17555	0.14	+1.1
4,437,969	-		ABI39_RS17555	0.17	+1.1
4,437,978	+		ABI39_RS17555	0.18	-0.1
4,437,979	-		ABI39_RS17555	0.18	+0.4
4,438,069	-		ABI39_RS17555	0.26	+1.0
4,438,069	-		ABI39_RS17555	0.26	+0.1
4,438,103	-		ABI39_RS17555	0.29	+1.5
4,438,105	-		ABI39_RS17555	0.29	+1.3
4,438,113	+		ABI39_RS17555	0.30	-0.0
4,438,113	+		ABI39_RS17555	0.30	-0.3
4,438,114	-		ABI39_RS17555	0.30	+1.6
4,438,116	-		ABI39_RS17555	0.30	+1.5
4,438,290	+		ABI39_RS17555	0.46	-0.3
4,438,290	+		ABI39_RS17555	0.46	-0.4
4,438,291	-		ABI39_RS17555	0.46	+0.2
4,438,291	-		ABI39_RS17555	0.46	+0.6
4,438,291	-		ABI39_RS17555	0.46	+2.0
4,438,341	+		ABI39_RS17555	0.50	+0.9
4,438,369	-		ABI39_RS17555	0.53	+0.9
4,438,422	+		ABI39_RS17555	0.58	-0.1
4,438,422	+		ABI39_RS17555	0.58	-0.2
4,438,456	-		ABI39_RS17555	0.61	+2.4
4,438,523	+		ABI39_RS17555	0.67	+0.0
4,438,620	+		ABI39_RS17555	0.75	-0.2
4,438,649	+		ABI39_RS17555	0.78	-0.5
4,438,649	+		ABI39_RS17555	0.78	+0.1
4,438,673	+		ABI39_RS17555	0.80	+0.8
4,438,674	-		ABI39_RS17555	0.80	+1.9
4,438,715	+		ABI39_RS17555	0.84	-0.8
4,438,716	-		ABI39_RS17555	0.84	+1.4
4,438,750	-		ABI39_RS17555	0.87	+0.4
4,438,816	+				+0.0
4,438,848	-				-0.6
4,438,848	-				+0.8
4,438,893	+				-0.3
4,438,925	+				-0.3
4,439,034	+		ABI39_RS17560	0.16	-0.5
4,439,038	+		ABI39_RS17560	0.17	+0.8
4,439,042	+		ABI39_RS17560	0.17	-1.5
4,439,135	-		ABI39_RS17560	0.28	+1.5
4,439,190	-		ABI39_RS17560	0.34	+1.6
4,439,213	-		ABI39_RS17560	0.37	+0.6
4,439,246	-		ABI39_RS17560	0.40	-0.0
4,439,249	+		ABI39_RS17560	0.41	-1.4
4,439,250	-		ABI39_RS17560	0.41	+0.8
4,439,314	+		ABI39_RS17560	0.48	+0.6
4,439,366	+		ABI39_RS17560	0.54	-0.2
4,439,367	-		ABI39_RS17560	0.54	+0.2
4,439,436	+		ABI39_RS17560	0.62	+0.2
4,439,454	+		ABI39_RS17560	0.64	-1.3
4,439,549	-		ABI39_RS17560	0.75	+0.9
4,439,573	+		ABI39_RS17560	0.78	+0.4
4,439,594	-		ABI39_RS17560	0.80	+1.4
4,439,624	-		ABI39_RS17560	0.84	-0.3
4,439,727	+				+0.6
4,439,728	-				+1.1
4,439,740	+				+0.8
4,439,744	+				-2.6
4,439,755	+				-2.1
4,439,800	-				+1.0
4,439,801	+				-0.2
4,439,803	+				+0.7
4,439,804	-				+0.2
4,439,805	+				-0.6
4,439,805	+				+0.5
4,439,837	+				+0.3
4,439,851	+				+0.2