Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS00100

Experiment: Glycogen; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycogen; autoclaved 2.5 mg/ml (C)
21,657	-		ABI39_RS00095	0.64	-2.9
21,687	-		ABI39_RS00095	0.65	-0.3
21,861	-		ABI39_RS00095	0.73	-1.4
21,969	-		ABI39_RS00095	0.78	+0.2
22,000	-		ABI39_RS00095	0.80	-0.7
22,010	-		ABI39_RS00095	0.80	-0.9
22,146	+		ABI39_RS00095	0.87	-1.3
22,210	-		ABI39_RS00095	0.89	-1.5
22,429	-				-0.8
22,443	+				-1.0
22,443	+				-0.7
22,457	+				-1.9
22,570	+				-0.4
22,580	+				-0.1
22,581	-				+0.6
22,644	-				-0.4
22,670	-				+0.0
22,714	+				+0.1
22,714	+				-2.0
22,715	-				-2.2
22,740	-		ABI39_RS00100	0.11	+1.3
22,785	-		ABI39_RS00100	0.15	-1.0
22,786	+		ABI39_RS00100	0.15	-0.4
22,791	-		ABI39_RS00100	0.15	+0.2
22,862	-		ABI39_RS00100	0.21	-0.1
23,076	+		ABI39_RS00100	0.40	-1.0
23,095	+		ABI39_RS00100	0.42	-0.5
23,096	-		ABI39_RS00100	0.42	-0.2
23,096	-		ABI39_RS00100	0.42	+0.2
23,187	+		ABI39_RS00100	0.50	+0.0
23,232	+		ABI39_RS00100	0.54	+0.3
23,258	+		ABI39_RS00100	0.56	-0.0
23,419	+		ABI39_RS00100	0.71	+1.2
23,422	-		ABI39_RS00100	0.71	-0.1
23,447	+		ABI39_RS00100	0.73	-0.2
23,448	-		ABI39_RS00100	0.73	+0.1
23,448	-		ABI39_RS00100	0.73	-0.5
23,448	-		ABI39_RS00100	0.73	-0.6
23,460	+		ABI39_RS00100	0.74	-0.3
23,464	+		ABI39_RS00100	0.75	-0.2
23,465	-		ABI39_RS00100	0.75	-2.1
23,465	-		ABI39_RS00100	0.75	-0.4
23,466	+		ABI39_RS00100	0.75	+0.7
23,467	-		ABI39_RS00100	0.75	-0.1
23,468	+		ABI39_RS00100	0.75	-0.2
23,505	-		ABI39_RS00100	0.78	-0.4
23,521	+		ABI39_RS00100	0.80	+0.5
23,522	-		ABI39_RS00100	0.80	-0.0
23,531	-		ABI39_RS00100	0.80	-0.5
23,556	-		ABI39_RS00100	0.83	-0.4
23,556	-		ABI39_RS00100	0.83	-0.7
23,559	+		ABI39_RS00100	0.83	-2.4
23,559	+		ABI39_RS00100	0.83	-0.4
23,559	+		ABI39_RS00100	0.83	+0.4
23,709	+				-0.3
23,776	+				-0.0
23,859	+				-0.6
23,860	-				-2.6
23,865	+				+0.1
23,908	+				+0.5
23,950	-		ABI39_RS00105	0.32	+1.0
24,079	-				+0.2
24,242	+				-0.0
24,336	+				-0.0
24,403	-		ABI39_RS00110	0.11	-0.5
24,435	-		ABI39_RS00110	0.12	+0.2
24,521	+		ABI39_RS00110	0.15	+0.4
24,666	-		ABI39_RS00110	0.20	+0.1
24,666	-		ABI39_RS00110	0.20	-0.5
24,679	-		ABI39_RS00110	0.21	-0.2