Experiment: Glycogen; autoclaved 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABI39_RS17065 and ABI39_RS17070 overlap by 4 nucleotides ABI39_RS17070 and ABI39_RS17075 are separated by 2 nucleotides ABI39_RS17075 and ABI39_RS17080 are separated by 144 nucleotides
ABI39_RS17065: ABI39_RS17065 - glycine betaine/L-proline ABC transporter ATP-binding protein, at 4,323,891 to 4,325,117
_RS17065
ABI39_RS17070: ABI39_RS17070 - proline/glycine betaine ABC transporter permease, at 4,325,114 to 4,325,938
_RS17070
ABI39_RS17075: ABI39_RS17075 - glycine betaine ABC transporter substrate-binding protein, at 4,325,941 to 4,326,783
_RS17075
ABI39_RS17080: ABI39_RS17080 - DMT family transporter, at 4,326,928 to 4,327,836
_RS17080
Position (kb) 4325
4326 Strain fitness (log2 ratio) -1
0
1 at 4324.210 kb on + strand, within ABI39_RS17065 at 4324.214 kb on + strand, within ABI39_RS17065 at 4324.214 kb on + strand, within ABI39_RS17065 at 4324.215 kb on - strand, within ABI39_RS17065 at 4324.215 kb on - strand, within ABI39_RS17065 at 4324.340 kb on - strand, within ABI39_RS17065 at 4324.575 kb on - strand, within ABI39_RS17065 at 4324.854 kb on - strand, within ABI39_RS17065 at 4324.884 kb on - strand, within ABI39_RS17065 at 4324.891 kb on + strand, within ABI39_RS17065 at 4324.892 kb on - strand, within ABI39_RS17065 at 4324.995 kb on + strand at 4324.996 kb on - strand at 4325.085 kb on - strand at 4325.133 kb on - strand at 4325.214 kb on + strand, within ABI39_RS17070 at 4325.215 kb on - strand, within ABI39_RS17070 at 4325.232 kb on + strand, within ABI39_RS17070 at 4325.233 kb on - strand, within ABI39_RS17070 at 4325.256 kb on + strand, within ABI39_RS17070 at 4325.262 kb on + strand, within ABI39_RS17070 at 4325.413 kb on + strand, within ABI39_RS17070 at 4325.678 kb on - strand, within ABI39_RS17070 at 4325.815 kb on - strand, within ABI39_RS17070 at 4325.880 kb on + strand at 4325.881 kb on - strand at 4325.936 kb on + strand at 4325.936 kb on + strand at 4325.936 kb on + strand at 4325.937 kb on - strand at 4325.957 kb on - strand at 4326.033 kb on - strand, within ABI39_RS17075 at 4326.129 kb on + strand, within ABI39_RS17075 at 4326.129 kb on + strand, within ABI39_RS17075 at 4326.130 kb on - strand, within ABI39_RS17075 at 4326.130 kb on - strand, within ABI39_RS17075 at 4326.130 kb on - strand, within ABI39_RS17075 at 4326.205 kb on - strand, within ABI39_RS17075 at 4326.284 kb on - strand, within ABI39_RS17075 at 4326.311 kb on + strand, within ABI39_RS17075 at 4326.372 kb on + strand, within ABI39_RS17075 at 4326.373 kb on - strand, within ABI39_RS17075 at 4326.650 kb on + strand, within ABI39_RS17075 at 4326.692 kb on + strand, within ABI39_RS17075 at 4326.787 kb on + strand at 4326.788 kb on - strand at 4326.796 kb on + strand at 4326.797 kb on - strand at 4326.820 kb on - strand at 4326.857 kb on - strand at 4326.866 kb on - strand at 4326.908 kb on + strand at 4326.911 kb on + strand at 4326.922 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycogen; autoclaved 2.5 mg/ml (C) remove 4,324,210 + ABI39_RS17065 0.26 +0.2 4,324,214 + ABI39_RS17065 0.26 -0.1 4,324,214 + ABI39_RS17065 0.26 +0.4 4,324,215 - ABI39_RS17065 0.26 -0.9 4,324,215 - ABI39_RS17065 0.26 -0.8 4,324,340 - ABI39_RS17065 0.37 -1.0 4,324,575 - ABI39_RS17065 0.56 +0.0 4,324,854 - ABI39_RS17065 0.78 -1.6 4,324,884 - ABI39_RS17065 0.81 +0.3 4,324,891 + ABI39_RS17065 0.81 -0.7 4,324,892 - ABI39_RS17065 0.82 +0.5 4,324,995 + -1.1 4,324,996 - +0.2 4,325,085 - +0.3 4,325,133 - +0.2 4,325,214 + ABI39_RS17070 0.12 -1.4 4,325,215 - ABI39_RS17070 0.12 -0.6 4,325,232 + ABI39_RS17070 0.14 -0.4 4,325,233 - ABI39_RS17070 0.14 +0.2 4,325,256 + ABI39_RS17070 0.17 -0.4 4,325,262 + ABI39_RS17070 0.18 -0.1 4,325,413 + ABI39_RS17070 0.36 -0.4 4,325,678 - ABI39_RS17070 0.68 +0.2 4,325,815 - ABI39_RS17070 0.85 +0.2 4,325,880 + -0.6 4,325,881 - +0.4 4,325,936 + -0.4 4,325,936 + -0.2 4,325,936 + -0.6 4,325,937 - -0.3 4,325,957 - +0.3 4,326,033 - ABI39_RS17075 0.11 +0.4 4,326,129 + ABI39_RS17075 0.22 +0.2 4,326,129 + ABI39_RS17075 0.22 +0.4 4,326,130 - ABI39_RS17075 0.22 -1.3 4,326,130 - ABI39_RS17075 0.22 +0.5 4,326,130 - ABI39_RS17075 0.22 +0.7 4,326,205 - ABI39_RS17075 0.31 -0.1 4,326,284 - ABI39_RS17075 0.41 +0.4 4,326,311 + ABI39_RS17075 0.44 +0.4 4,326,372 + ABI39_RS17075 0.51 -0.2 4,326,373 - ABI39_RS17075 0.51 +0.3 4,326,650 + ABI39_RS17075 0.84 -1.4 4,326,692 + ABI39_RS17075 0.89 +0.3 4,326,787 + +0.8 4,326,788 - +0.2 4,326,796 + +0.4 4,326,797 - -0.1 4,326,820 - +0.5 4,326,857 - +0.2 4,326,866 - -0.3 4,326,908 + +0.3 4,326,911 + -0.3 4,326,922 + +0.1
Or see this region's nucleotide sequence