Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS11460

Experiment: Glycogen; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycogen; autoclaved 2.5 mg/ml (C)
3,046,450	-		ABI39_RS11450	0.67	+0.0
3,046,566	+		ABI39_RS11450	0.76	-0.1
3,046,643	-		ABI39_RS11450	0.82	-1.8
3,046,643	-		ABI39_RS11450	0.82	-0.4
3,046,643	-		ABI39_RS11450	0.82	-0.3
3,046,645	-		ABI39_RS11450	0.82	+0.0
3,046,951	-		ABI39_RS11455	0.14	+0.2
3,046,970	+		ABI39_RS11455	0.19	+0.5
3,046,976	-		ABI39_RS11455	0.20	+0.7
3,046,982	-		ABI39_RS11455	0.22	+0.1
3,047,106	+		ABI39_RS11455	0.51	+0.1
3,047,187	-		ABI39_RS11455	0.71	+0.3
3,047,188	+		ABI39_RS11455	0.71	+0.4
3,047,192	+		ABI39_RS11455	0.72	+1.1
3,047,192	+		ABI39_RS11455	0.72	-0.4
3,047,193	-		ABI39_RS11455	0.72	+0.6
3,047,193	-		ABI39_RS11455	0.72	-0.5
3,047,239	+		ABI39_RS11455	0.83	+0.3
3,047,320	+				-0.1
3,047,321	-				+0.8
3,047,394	-				+0.0
3,047,526	-				-0.1
3,047,728	-		ABI39_RS11460	0.13	-0.4
3,047,877	+		ABI39_RS11460	0.20	-1.5
3,047,998	-		ABI39_RS11460	0.26	-0.1
3,048,045	+		ABI39_RS11460	0.28	-0.5
3,048,046	-		ABI39_RS11460	0.28	-0.1
3,048,102	-		ABI39_RS11460	0.30	-1.2
3,048,118	+		ABI39_RS11460	0.31	-0.6
3,048,309	-		ABI39_RS11460	0.40	-1.6
3,048,329	+		ABI39_RS11460	0.41	-0.7
3,048,409	-		ABI39_RS11460	0.44	-0.8
3,048,420	+		ABI39_RS11460	0.45	-0.7
3,048,586	-		ABI39_RS11460	0.52	-0.6
3,048,715	-		ABI39_RS11460	0.58	+0.1
3,048,895	+		ABI39_RS11460	0.66	-0.3
3,048,936	+		ABI39_RS11460	0.68	-1.2
3,049,063	-		ABI39_RS11460	0.74	-0.1
3,049,132	-		ABI39_RS11460	0.77	+0.0
3,049,167	-		ABI39_RS11460	0.79	-1.1
3,049,184	+		ABI39_RS11460	0.79	-0.5
3,049,185	-		ABI39_RS11460	0.79	-0.3
3,049,186	+		ABI39_RS11460	0.80	-0.0
3,049,186	+		ABI39_RS11460	0.80	-1.4
3,049,199	-		ABI39_RS11460	0.80	-0.7
3,049,315	+		ABI39_RS11460	0.85	-0.5
3,049,462	-				-0.8
3,049,510	+				-0.5
3,049,627	+				-0.7
3,049,652	+				-0.3
3,049,698	+				-0.6
3,049,723	+				-0.6
3,049,724	-				+0.6
3,049,773	+				+0.4
3,049,793	+				-0.1
3,049,906	-				+0.1
3,050,191	+		ABI39_RS11465	0.15	-0.4
3,050,243	-		ABI39_RS11465	0.18	+0.2
3,050,428	+		ABI39_RS11465	0.28	+0.2
3,050,442	-		ABI39_RS11465	0.29	+0.2
3,050,512	-		ABI39_RS11465	0.32	+0.4
3,050,556	-		ABI39_RS11465	0.35	+0.5
3,050,570	-		ABI39_RS11465	0.35	+0.4
3,050,625	+		ABI39_RS11465	0.38	-0.5
3,050,626	-		ABI39_RS11465	0.38	-0.3
3,050,626	-		ABI39_RS11465	0.38	+0.4
3,050,626	-		ABI39_RS11465	0.38	+0.2