Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS05410

Experiment: Glycogen; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycogen; autoclaved 2.5 mg/ml (C)
1,503,565	-		ABI39_RS05405	0.52	-2.4
1,503,586	-		ABI39_RS05405	0.53	-1.6
1,503,586	-		ABI39_RS05405	0.53	-2.6
1,503,590	+		ABI39_RS05405	0.53	-1.9
1,503,620	+		ABI39_RS05405	0.55	-0.0
1,503,621	-		ABI39_RS05405	0.55	-2.7
1,503,917	-		ABI39_RS05405	0.71	-2.0
1,503,938	+		ABI39_RS05405	0.72	-1.7
1,504,105	-		ABI39_RS05405	0.81	-2.1
1,504,132	+		ABI39_RS05405	0.82	-1.5
1,504,248	-		ABI39_RS05405	0.89	-1.6
1,504,490	+				-1.3
1,504,539	+				-1.1
1,504,649	+		ABI39_RS05410	0.24	-1.6
1,504,660	+		ABI39_RS05410	0.26	-1.2
1,504,675	-		ABI39_RS05410	0.29	-1.8
1,504,686	-		ABI39_RS05410	0.31	-0.7
1,504,695	-		ABI39_RS05410	0.33	-0.7
1,504,695	-		ABI39_RS05410	0.33	-1.5
1,504,794	-		ABI39_RS05410	0.52	-1.3
1,504,838	+		ABI39_RS05410	0.60	-1.0
1,504,839	-		ABI39_RS05410	0.60	-1.3
1,504,868	+		ABI39_RS05410	0.66	-1.4
1,504,869	-		ABI39_RS05410	0.66	-0.4
1,504,889	+		ABI39_RS05410	0.70	-1.6
1,504,889	+		ABI39_RS05410	0.70	-0.8
1,504,931	+		ABI39_RS05410	0.78	-0.6
1,505,037	+				-0.1
1,505,038	-				-0.9
1,505,042	+				+0.8
1,505,096	-				-0.2
1,505,096	-				-1.3
1,505,096	-				+0.6
1,505,150	+				-0.7
1,505,151	+				-0.3
1,505,152	+				+0.0
1,505,175	+				+0.7
1,505,176	-				-0.1
1,505,176	-				-0.4
1,505,178	-				+1.0
1,505,362	+				+0.1
1,505,373	-				-1.2
1,505,380	+				-0.9
1,505,386	-				-0.1
1,505,393	+				-0.2
1,505,447	-				-0.1
1,505,509	-				-0.1
1,505,551	-				-0.9
1,505,695	+		ABI39_RS05415	0.16	-0.2
1,505,711	+		ABI39_RS05415	0.17	-1.1
1,505,745	+		ABI39_RS05415	0.19	+0.4
1,505,796	+		ABI39_RS05415	0.22	+0.1
1,505,849	-		ABI39_RS05415	0.25	+0.2
1,505,964	-		ABI39_RS05415	0.31	-0.2
1,505,988	+		ABI39_RS05415	0.32	+0.5
1,506,044	-		ABI39_RS05415	0.35	-0.1