Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS11570

Experiment: Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C)
3,076,318	-		ABI39_RS11565	0.17	+0.5
3,076,318	-		ABI39_RS11565	0.17	+1.2
3,076,338	-		ABI39_RS11565	0.19	-3.8
3,076,583	+		ABI39_RS11565	0.44	+1.3
3,076,584	-		ABI39_RS11565	0.44	+0.3
3,076,584	-		ABI39_RS11565	0.44	-0.0
3,076,681	+		ABI39_RS11565	0.54	-2.4
3,076,749	-		ABI39_RS11565	0.61	-0.6
3,076,757	+		ABI39_RS11565	0.61	-2.3
3,076,872	+		ABI39_RS11565	0.73	+0.5
3,076,916	-		ABI39_RS11565	0.77	-0.9
3,076,919	+		ABI39_RS11565	0.78	-2.6
3,076,923	+		ABI39_RS11565	0.78	+0.4
3,077,029	+		ABI39_RS11565	0.89	+3.8
3,077,201	+				-2.4
3,077,202	-				+0.4
3,077,233	+				+0.2
3,077,441	+		ABI39_RS11570	0.26	+0.6
3,077,441	+		ABI39_RS11570	0.26	+0.7
3,077,442	-		ABI39_RS11570	0.26	-3.4
3,077,505	+		ABI39_RS11570	0.34	+0.9
3,077,532	-		ABI39_RS11570	0.37	+1.3
3,077,537	-		ABI39_RS11570	0.38	+0.5
3,077,537	-		ABI39_RS11570	0.38	+0.3
3,077,654	+		ABI39_RS11570	0.52	-2.7
3,077,671	+		ABI39_RS11570	0.54	+0.6
3,077,718	-		ABI39_RS11570	0.60	+0.5
3,077,738	-		ABI39_RS11570	0.62	+0.4
3,077,743	-		ABI39_RS11570	0.63	+2.3
3,077,996	+				-3.8
3,078,036	+				+0.9