Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS11360

Experiment: Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C)
3,021,101	-		ABI39_RS11355	0.17	+0.1
3,021,163	+		ABI39_RS11355	0.23	+0.2
3,021,383	-		ABI39_RS11355	0.42	+0.1
3,021,396	-		ABI39_RS11355	0.43	-1.4
3,021,396	-		ABI39_RS11355	0.43	+1.3
3,021,420	-		ABI39_RS11355	0.45	-2.6
3,021,449	-		ABI39_RS11355	0.47	+0.4
3,021,601	+		ABI39_RS11355	0.60	+0.7
3,021,777	+		ABI39_RS11355	0.76	-0.9
3,021,778	-		ABI39_RS11355	0.76	-0.3
3,021,779	+		ABI39_RS11355	0.76	-1.3
3,021,780	-		ABI39_RS11355	0.76	+1.8
3,021,781	+		ABI39_RS11355	0.76	-2.1
3,021,896	-		ABI39_RS11355	0.86	+0.4
3,021,982	+				-1.3
3,021,985	-				-2.6
3,021,986	+				+0.5
3,021,995	+				+2.5
3,021,997	+				-0.3
3,021,998	-				-0.6
3,022,000	-				-3.3
3,022,002	-				-1.3
3,022,002	-				-1.0
3,022,002	-				+0.2
3,022,002	-				-2.4
3,022,006	-				-1.0
3,022,027	+				+0.6
3,022,290	+		ABI39_RS11360	0.24	-2.6
3,022,290	+		ABI39_RS11360	0.24	+1.3
3,022,375	-		ABI39_RS11360	0.34	-0.6
3,022,375	-		ABI39_RS11360	0.34	-1.7
3,022,446	-		ABI39_RS11360	0.42	+0.3
3,022,484	+		ABI39_RS11360	0.46	-0.5
3,022,484	+		ABI39_RS11360	0.46	+0.2
3,022,485	-		ABI39_RS11360	0.46	-2.5
3,022,491	-		ABI39_RS11360	0.47	-3.4
3,022,563	-		ABI39_RS11360	0.55	-3.8
3,022,585	-		ABI39_RS11360	0.58	-3.2
3,022,923	-				-2.5
3,022,923	-				+0.6
3,022,948	+				+0.5
3,023,145	-		ABI39_RS11365	0.14	+0.6
3,023,378	+		ABI39_RS11365	0.31	+0.6
3,023,688	-		ABI39_RS11365	0.54	+2.4