Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS03120

Experiment: Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C)
911,217	+		ABI39_RS03115	0.72	-0.3
911,444	+		ABI39_RS03115	0.88	+0.5
911,572	-				+0.1
911,658	+		ABI39_RS03120	0.12	+0.1
911,740	+		ABI39_RS03120	0.34	-0.8
911,741	-		ABI39_RS03120	0.35	+1.2
911,741	-		ABI39_RS03120	0.35	+1.6
911,765	+		ABI39_RS03120	0.41	+1.8
911,766	-		ABI39_RS03120	0.41	-0.3
912,053	+				+0.7
912,053	+				+0.7
912,082	-				+1.4
912,096	+				-0.2
912,165	-				+1.2
912,172	+				-3.0
912,202	-				+1.5
912,228	-				+0.1
912,279	+				-3.3
912,290	-				+0.1
912,313	+				+0.8
912,341	-				+1.6
912,363	+		ABI39_RS03125	0.11	+1.0
912,417	-		ABI39_RS03125	0.17	-0.2
912,533	-		ABI39_RS03125	0.29	+0.2
912,557	-		ABI39_RS03125	0.32	+0.1
912,617	+		ABI39_RS03125	0.38	-0.3
912,663	-		ABI39_RS03125	0.43	+0.1
912,663	-		ABI39_RS03125	0.43	+0.6
912,729	-		ABI39_RS03125	0.51	-0.5
912,897	-		ABI39_RS03125	0.69	+0.5
912,901	-		ABI39_RS03125	0.69	-3.0