Strain Fitness in Escherichia coli ECRC102 around NIAGMN_17340

Experiment: T2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	T2
3,423,769	+				-1.5
3,423,770	-				-2.5
3,423,770	-				+1.2
3,423,770	-				+0.3
3,423,784	-				+0.1
3,423,798	-				-0.6
3,423,804	+				+0.6
3,423,804	+				-1.7
3,423,826	+				-0.1
3,423,826	+				+0.3
3,423,826	+				+0.1
3,424,248	+	xerD	NIAGMN_17335	0.46	-0.1
3,424,265	-	xerD	NIAGMN_17335	0.48	-0.4
3,424,638	-	xerD	NIAGMN_17335	0.89	+0.0
3,424,758	+				-0.5
3,424,773	+				-0.4
3,424,773	+				+1.3
3,424,773	+				+0.4
3,424,773	+				-0.1
3,424,773	+				+0.3
3,424,774	-				+1.3
3,424,774	-				+0.1
3,424,774	-				-0.4
3,424,782	+				+0.4
3,424,783	-				-0.6
3,424,889	+	dsbC	NIAGMN_17340	0.18	+0.2
3,424,914	+	dsbC	NIAGMN_17340	0.22	-0.3
3,424,930	+	dsbC	NIAGMN_17340	0.24	+0.4
3,424,930	+	dsbC	NIAGMN_17340	0.24	+0.4
3,424,930	+	dsbC	NIAGMN_17340	0.24	+0.9
3,424,930	+	dsbC	NIAGMN_17340	0.24	-0.5
3,424,931	-	dsbC	NIAGMN_17340	0.24	-0.4
3,424,947	+	dsbC	NIAGMN_17340	0.26	-0.4
3,424,947	+	dsbC	NIAGMN_17340	0.26	-1.1
3,424,947	+	dsbC	NIAGMN_17340	0.26	-0.7
3,424,947	+	dsbC	NIAGMN_17340	0.26	-0.2
3,424,953	+	dsbC	NIAGMN_17340	0.27	-2.4
3,424,953	+	dsbC	NIAGMN_17340	0.27	+1.3
3,424,953	+	dsbC	NIAGMN_17340	0.27	-0.0
3,424,953	+	dsbC	NIAGMN_17340	0.27	-1.7
3,424,953	+	dsbC	NIAGMN_17340	0.27	-0.4
3,424,953	+	dsbC	NIAGMN_17340	0.27	-1.0
3,424,953	+	dsbC	NIAGMN_17340	0.27	+0.4
3,424,954	-	dsbC	NIAGMN_17340	0.27	-0.0
3,424,954	-	dsbC	NIAGMN_17340	0.27	+0.0
3,424,954	-	dsbC	NIAGMN_17340	0.27	+1.0
3,424,954	-	dsbC	NIAGMN_17340	0.27	+0.8
3,424,954	-	dsbC	NIAGMN_17340	0.27	+0.9
3,424,972	+	dsbC	NIAGMN_17340	0.30	+0.0
3,424,972	+	dsbC	NIAGMN_17340	0.30	+0.6
3,424,972	+	dsbC	NIAGMN_17340	0.30	-0.3
3,424,972	+	dsbC	NIAGMN_17340	0.30	-0.8
3,424,972	+	dsbC	NIAGMN_17340	0.30	+0.7
3,424,972	+	dsbC	NIAGMN_17340	0.30	+0.6
3,424,972	+	dsbC	NIAGMN_17340	0.30	-0.1
3,424,973	-	dsbC	NIAGMN_17340	0.30	-1.5
3,424,973	-	dsbC	NIAGMN_17340	0.30	+0.4
3,424,973	-	dsbC	NIAGMN_17340	0.30	-0.1
3,424,973	-	dsbC	NIAGMN_17340	0.30	-2.0
3,425,010	+	dsbC	NIAGMN_17340	0.35	+0.1
3,425,010	+	dsbC	NIAGMN_17340	0.35	+0.9
3,425,010	+	dsbC	NIAGMN_17340	0.35	+3.7
3,425,010	+	dsbC	NIAGMN_17340	0.35	+1.1
3,425,011	-	dsbC	NIAGMN_17340	0.35	-0.4
3,425,021	+	dsbC	NIAGMN_17340	0.37	-1.2
3,425,022	-	dsbC	NIAGMN_17340	0.37	+1.0
3,425,062	-	dsbC	NIAGMN_17340	0.43	+1.1
3,425,097	+	dsbC	NIAGMN_17340	0.48	+0.2
3,425,097	+	dsbC	NIAGMN_17340	0.48	-1.1
3,425,103	+	dsbC	NIAGMN_17340	0.48	+0.6
3,425,104	-	dsbC	NIAGMN_17340	0.49	+0.7
3,425,104	-	dsbC	NIAGMN_17340	0.49	+0.5
3,425,106	+	dsbC	NIAGMN_17340	0.49	-0.3
3,425,106	+	dsbC	NIAGMN_17340	0.49	+0.0
3,425,106	+	dsbC	NIAGMN_17340	0.49	+0.2
3,425,106	+	dsbC	NIAGMN_17340	0.49	-0.1
3,425,107	-	dsbC	NIAGMN_17340	0.49	-0.4
3,425,149	+	dsbC	NIAGMN_17340	0.55	-0.4
3,425,149	+	dsbC	NIAGMN_17340	0.55	+0.1
3,425,149	+	dsbC	NIAGMN_17340	0.55	+0.5
3,425,149	+	dsbC	NIAGMN_17340	0.55	+0.1
3,425,149	+	dsbC	NIAGMN_17340	0.55	-2.2
3,425,149	+	dsbC	NIAGMN_17340	0.55	+0.2
3,425,149	+	dsbC	NIAGMN_17340	0.55	+0.4
3,425,150	-	dsbC	NIAGMN_17340	0.55	+0.6
3,425,150	-	dsbC	NIAGMN_17340	0.55	-1.1
3,425,150	-	dsbC	NIAGMN_17340	0.55	+0.8
3,425,150	-	dsbC	NIAGMN_17340	0.55	-1.3
3,425,151	+	dsbC	NIAGMN_17340	0.55	+0.4
3,425,151	+	dsbC	NIAGMN_17340	0.55	-1.0
3,425,177	-	dsbC	NIAGMN_17340	0.59	+0.2
3,425,232	+	dsbC	NIAGMN_17340	0.67	-0.7
3,425,284	-	dsbC	NIAGMN_17340	0.74	+1.1
3,425,316	+	dsbC	NIAGMN_17340	0.78	-0.4
3,425,329	+	dsbC	NIAGMN_17340	0.80	+0.6
3,425,467	+				+1.5
3,425,468	-				-1.1
3,425,488	+				+0.0
3,425,488	+				+0.0
3,425,489	-				-2.8
3,425,489	-				+0.2
3,425,489	-				-1.5
3,425,489	-				-0.4
3,425,561	-				-0.3
3,425,562	+				-0.6
3,425,578	+				-0.9
3,425,578	+				+0.1
3,425,579	-				+1.0
3,425,615	+				-0.1
3,425,615	+				-1.2
3,425,667	+	recJ	NIAGMN_17345	0.11	-0.5
3,425,667	+	recJ	NIAGMN_17345	0.11	-0.4
3,425,667	+	recJ	NIAGMN_17345	0.11	-0.6
3,425,668	-	recJ	NIAGMN_17345	0.11	+1.7
3,425,668	-	recJ	NIAGMN_17345	0.11	+1.1
3,425,696	+	recJ	NIAGMN_17345	0.13	+0.3
3,425,697	-	recJ	NIAGMN_17345	0.13	+0.3
3,425,697	-	recJ	NIAGMN_17345	0.13	-1.3
3,425,743	+	recJ	NIAGMN_17345	0.15	-0.1
3,425,743	+	recJ	NIAGMN_17345	0.15	+0.7
3,425,869	+	recJ	NIAGMN_17345	0.23	+0.2
3,425,869	+	recJ	NIAGMN_17345	0.23	-0.4
3,425,891	+	recJ	NIAGMN_17345	0.24	-1.2
3,425,891	+	recJ	NIAGMN_17345	0.24	-0.4
3,425,892	-	recJ	NIAGMN_17345	0.24	-1.6
3,426,006	-	recJ	NIAGMN_17345	0.31	+0.4
3,426,063	+	recJ	NIAGMN_17345	0.34	+0.2
3,426,063	+	recJ	NIAGMN_17345	0.34	+0.1
3,426,063	+	recJ	NIAGMN_17345	0.34	-0.6
3,426,064	-	recJ	NIAGMN_17345	0.34	+0.6
3,426,064	-	recJ	NIAGMN_17345	0.34	-1.1
3,426,134	+	recJ	NIAGMN_17345	0.38	-0.7
3,426,201	-	recJ	NIAGMN_17345	0.42	+1.1
3,426,201	-	recJ	NIAGMN_17345	0.42	-1.0
3,426,203	+	recJ	NIAGMN_17345	0.42	-2.4
3,426,322	+	recJ	NIAGMN_17345	0.49	-1.0
3,426,323	-	recJ	NIAGMN_17345	0.49	-1.3
3,426,371	+	recJ	NIAGMN_17345	0.52	-0.4
3,426,371	+	recJ	NIAGMN_17345	0.52	+0.7
3,426,371	+	recJ	NIAGMN_17345	0.52	-0.0
3,426,371	+	recJ	NIAGMN_17345	0.52	-0.5
3,426,371	+	recJ	NIAGMN_17345	0.52	-2.3
3,426,372	-	recJ	NIAGMN_17345	0.52	-0.1