Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS15355

Experiment: Galactan from Potato; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Galactan from Potato; filtered 2.5 mg/ml (C)
3,974,873	+		ABI39_RS15345	0.83	-0.4
3,974,874	-		ABI39_RS15345	0.83	+1.6
3,974,882	+		ABI39_RS15345	0.84	+2.7
3,974,934	+				-1.9
3,974,971	-				-1.1
3,975,053	+		ABI39_RS15350	0.28	-0.7
3,975,153	-		ABI39_RS15350	0.63	+0.1
3,975,205	-		ABI39_RS15350	0.82	-0.7
3,975,205	-		ABI39_RS15350	0.82	+1.6
3,975,208	+		ABI39_RS15350	0.83	-0.8
3,975,208	+		ABI39_RS15350	0.83	+0.7
3,975,209	-		ABI39_RS15350	0.84	+1.0
3,975,240	+				-1.9
3,975,243	-				-0.1
3,975,243	-				+0.9
3,975,321	+				-0.8
3,975,321	+				-3.4
3,975,324	-				-0.1
3,975,373	+				-0.6
3,975,446	+				-0.6
3,975,446	+				-1.3
3,975,459	-				+0.3
3,975,459	-				+1.4
3,975,468	+				+0.3
3,975,468	+				-0.9
3,975,468	+				-0.0
3,975,475	+				-0.1
3,975,476	-				+1.8
3,975,476	-				+1.4
3,975,525	+				-0.7
3,975,576	+				+1.9
3,975,609	+				-0.4
3,975,609	+				+0.6
3,975,746	-				-0.6
3,975,812	-				+1.5
3,975,851	-				-0.1
3,975,855	-				+0.2
3,975,977	-		ABI39_RS15355	0.12	+0.7
3,976,127	+		ABI39_RS15355	0.30	+1.8
3,976,447	+		ABI39_RS15355	0.67	+2.4
3,976,503	+		ABI39_RS15355	0.74	-0.3
3,976,503	+		ABI39_RS15355	0.74	-0.2
3,976,504	-		ABI39_RS15355	0.74	-0.0
3,976,563	+		ABI39_RS15355	0.81	+2.0
3,976,570	+		ABI39_RS15355	0.82	-0.0
3,976,636	+		ABI39_RS15355	0.90	+2.1
3,976,637	-		ABI39_RS15355	0.90	-0.7
3,976,721	+				+2.2
3,976,725	+				+4.7
3,976,739	+				+1.2
3,976,754	+				+0.9
3,976,778	-				-0.6
3,976,780	-				-1.0
3,976,785	-				+0.6
3,976,798	+				+1.9
3,976,955	+				+4.4
3,976,961	+				-0.7
3,977,097	-		ABI39_RS15360	0.16	+2.5
3,977,247	+		ABI39_RS15360	0.28	-0.5
3,977,247	+		ABI39_RS15360	0.28	+2.4
3,977,249	+		ABI39_RS15360	0.28	+2.2
3,977,249	+		ABI39_RS15360	0.28	+1.2
3,977,546	+		ABI39_RS15360	0.51	+1.8
3,977,646	+		ABI39_RS15360	0.58	+2.7