Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS10075

Experiment: Galactan from Potato; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Galactan from Potato; filtered 2.5 mg/ml (C)
2,690,822	+		ABI39_RS10070	0.42	+1.3
2,691,123	-		ABI39_RS10070	0.60	-0.2
2,691,229	+		ABI39_RS10070	0.66	-0.3
2,691,295	+		ABI39_RS10070	0.70	+1.4
2,691,407	-		ABI39_RS10070	0.77	-1.4
2,691,434	-		ABI39_RS10070	0.78	+0.8
2,691,438	-		ABI39_RS10070	0.79	-0.3
2,691,476	-		ABI39_RS10070	0.81	+1.3
2,691,541	+		ABI39_RS10070	0.85	-0.2
2,691,541	+		ABI39_RS10070	0.85	-0.5
2,691,542	-		ABI39_RS10070	0.85	+0.9
2,691,578	-		ABI39_RS10070	0.87	-0.1
2,691,620	+		ABI39_RS10070	0.90	+0.2
2,691,812	-				-0.7
2,691,818	-				-0.4
2,691,924	+				-1.4
2,691,963	+		ABI39_RS10075	0.13	+0.1
2,691,963	+		ABI39_RS10075	0.13	-1.1
2,691,964	-		ABI39_RS10075	0.13	+0.1
2,691,965	+		ABI39_RS10075	0.13	-0.5
2,691,965	+		ABI39_RS10075	0.13	-0.7
2,691,965	-		ABI39_RS10075	0.13	-1.1
2,691,966	-		ABI39_RS10075	0.13	+0.3
2,691,986	+		ABI39_RS10075	0.15	-1.6
2,691,986	+		ABI39_RS10075	0.15	+0.0
2,692,044	+		ABI39_RS10075	0.20	-0.2
2,692,188	+		ABI39_RS10075	0.31	-0.6
2,692,220	-		ABI39_RS10075	0.34	+1.3
2,692,341	-		ABI39_RS10075	0.44	-0.5
2,692,394	-		ABI39_RS10075	0.48	-0.5
2,692,407	-		ABI39_RS10075	0.49	+0.6
2,692,470	-		ABI39_RS10075	0.55	+0.9
2,692,487	+		ABI39_RS10075	0.56	+0.3
2,692,495	+		ABI39_RS10075	0.57	-1.7
2,692,496	-		ABI39_RS10075	0.57	-0.2
2,692,531	+		ABI39_RS10075	0.60	-0.4
2,692,537	-		ABI39_RS10075	0.60	+0.6
2,692,544	+		ABI39_RS10075	0.61	-1.7
2,692,557	-		ABI39_RS10075	0.62	-1.8
2,692,585	+		ABI39_RS10075	0.64	+0.0
2,692,590	-		ABI39_RS10075	0.65	-0.2
2,692,590	-		ABI39_RS10075	0.65	+1.3
2,692,643	-		ABI39_RS10075	0.69	-0.4
2,692,668	+		ABI39_RS10075	0.71	-1.4
2,692,669	-		ABI39_RS10075	0.71	-1.2
2,692,673	-		ABI39_RS10075	0.71	+0.3
2,692,874	+		ABI39_RS10075	0.88	-0.7
2,692,875	-		ABI39_RS10075	0.88	+0.2
2,692,875	-		ABI39_RS10075	0.88	-1.0
2,692,985	+				-1.1
2,693,044	-				-0.1
2,693,074	-				+2.1
2,693,154	-				-0.4
2,693,213	+				-0.0
2,693,214	-				+0.3
2,693,220	-				+3.2
2,693,270	+				+0.0
2,693,313	-				+4.0
2,693,315	+				-1.3
2,693,337	-		ABI39_RS10080	0.11	-1.2
2,693,359	+		ABI39_RS10080	0.12	-0.6
2,693,538	+		ABI39_RS10080	0.23	-0.4
2,693,539	-		ABI39_RS10080	0.23	+1.4
2,693,539	-		ABI39_RS10080	0.23	+0.7
2,693,541	+		ABI39_RS10080	0.24	-0.9
2,693,544	-		ABI39_RS10080	0.24	+0.6
2,693,544	-		ABI39_RS10080	0.24	-0.9
2,693,555	+		ABI39_RS10080	0.24	+0.7
2,693,576	-		ABI39_RS10080	0.26	+0.5
2,693,639	-		ABI39_RS10080	0.30	+2.9
2,693,682	-		ABI39_RS10080	0.32	+1.9
2,693,686	-		ABI39_RS10080	0.33	-1.1
2,693,686	-		ABI39_RS10080	0.33	+2.6
2,693,687	+		ABI39_RS10080	0.33	-0.6
2,693,687	+		ABI39_RS10080	0.33	+0.8
2,693,688	-		ABI39_RS10080	0.33	+1.8
2,693,823	-		ABI39_RS10080	0.41	+2.9
2,693,830	+		ABI39_RS10080	0.41	+0.9
2,693,831	-		ABI39_RS10080	0.41	+2.1