Strain Fitness in Escherichia coli ECRC102 around NIAGMN_01955
Experiment: T2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | T2 |
---|---|---|---|---|---|
remove | |||||
354,250 | + | motA | NIAGMN_01950 | 0.55 | -1.4 |
354,424 | + | motA | NIAGMN_01950 | 0.75 | +0.0 |
354,426 | + | motA | NIAGMN_01950 | 0.75 | +0.1 |
354,565 | - | +0.1 | |||
354,631 | - | +0.1 | |||
354,636 | - | +0.3 | |||
354,636 | - | +0.9 | |||
354,644 | - | -2.5 | |||
354,644 | - | -0.7 | |||
354,821 | - | +0.3 | |||
354,844 | + | flhC | NIAGMN_01955 | 0.12 | +1.3 |
354,963 | - | flhC | NIAGMN_01955 | 0.32 | +0.8 |
355,051 | - | flhC | NIAGMN_01955 | 0.47 | +1.1 |
355,087 | + | flhC | NIAGMN_01955 | 0.54 | -0.2 |
355,232 | + | flhC | NIAGMN_01955 | 0.79 | -3.1 |
355,396 | - | flhD | NIAGMN_01960 | 0.11 | +0.2 |
355,483 | - | flhD | NIAGMN_01960 | 0.36 | -0.4 |
355,594 | + | flhD | NIAGMN_01960 | 0.68 | +0.6 |
355,651 | + | flhD | NIAGMN_01960 | 0.84 | +0.2 |
355,655 | - | flhD | NIAGMN_01960 | 0.85 | -0.1 |
355,677 | - | +0.6 | |||
355,702 | - | -0.2 | |||
355,806 | - | -0.3 | |||
355,865 | - | -0.9 | |||
355,885 | - | +1.5 | |||
355,885 | - | +0.1 | |||
355,937 | - | +1.3 | |||
355,937 | - | +1.5 | |||
355,937 | - | -0.2 | |||
356,226 | - | +0.2 |
Or see this region's nucleotide sequence