Strain Fitness in Escherichia coli ECRC102 around NIAGMN_01945
Experiment: T2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | T2 |
---|---|---|---|---|---|
remove | |||||
351,844 | - | cheA | NIAGMN_01940 | 0.50 | +0.9 |
351,905 | + | cheA | NIAGMN_01940 | 0.53 | -0.5 |
352,010 | - | cheA | NIAGMN_01940 | 0.58 | +0.0 |
352,452 | - | cheA | NIAGMN_01940 | 0.81 | -0.7 |
352,482 | + | cheA | NIAGMN_01940 | 0.82 | +0.1 |
352,482 | + | cheA | NIAGMN_01940 | 0.82 | +0.5 |
352,821 | - | +0.3 | |||
352,821 | - | +0.1 | |||
353,196 | - | motB | NIAGMN_01945 | 0.39 | -0.2 |
354,250 | + | motA | NIAGMN_01950 | 0.55 | -1.4 |
354,424 | + | motA | NIAGMN_01950 | 0.75 | +0.0 |
354,426 | + | motA | NIAGMN_01950 | 0.75 | +0.1 |
354,565 | - | +0.1 | |||
354,631 | - | +0.1 | |||
354,636 | - | +0.3 | |||
354,636 | - | +0.9 | |||
354,644 | - | -2.5 | |||
354,644 | - | -0.7 |
Or see this region's nucleotide sequence