Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS20015

Experiment: Galactan from Potato; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Galactan from Potato; filtered 2.5 mg/ml (C)
4,943,346	+		ABI39_RS20010	0.62	+2.3
4,943,397	+		ABI39_RS20010	0.65	+1.3
4,943,398	-		ABI39_RS20010	0.65	-0.4
4,943,472	-		ABI39_RS20010	0.69	+0.9
4,943,493	+		ABI39_RS20010	0.70	-1.4
4,943,495	+		ABI39_RS20010	0.71	-0.6
4,943,496	-		ABI39_RS20010	0.71	-1.3
4,943,507	+		ABI39_RS20010	0.71	+0.1
4,943,508	-		ABI39_RS20010	0.71	+0.5
4,943,510	+		ABI39_RS20010	0.71	+0.4
4,943,523	+		ABI39_RS20010	0.72	+0.8
4,943,528	+		ABI39_RS20010	0.73	+1.4
4,943,529	-		ABI39_RS20010	0.73	+0.8
4,943,534	+		ABI39_RS20010	0.73	+1.4
4,943,543	-		ABI39_RS20010	0.73	+0.7
4,943,709	+		ABI39_RS20010	0.83	+0.2
4,943,751	-		ABI39_RS20010	0.86	-1.6
4,943,751	-		ABI39_RS20010	0.86	+0.9
4,943,897	+				+1.0
4,944,015	+				+1.5
4,944,016	-				+0.4
4,944,017	+				+0.8
4,944,018	-				-0.9
4,944,018	-				-0.7
4,944,020	-				+0.6
4,944,025	-				+1.3
4,944,057	+				-0.1
4,944,057	+				+0.5
4,944,062	+				-2.0
4,944,063	-				+0.0
4,944,063	-				-1.3
4,944,066	+				-1.8
4,944,067	-				+0.2
4,944,067	-				+2.1
4,944,067	-				-0.9
4,944,072	-				+1.0
4,944,090	+				+0.7
4,944,092	+				-0.3
4,944,092	+				+0.7
4,944,112	+				+0.2
4,944,129	+				+7.0
4,944,184	+				+0.8
4,944,187	-				-0.5
4,944,230	-				-0.7
4,944,284	-				+1.9
4,944,323	-				+0.5
4,944,323	-				-0.3
4,944,409	+		ABI39_RS20015	0.12	+0.6
4,944,456	+		ABI39_RS20015	0.16	+1.7
4,944,657	+		ABI39_RS20015	0.30	+0.7
4,944,789	+		ABI39_RS20015	0.40	+2.7
4,945,070	+		ABI39_RS20015	0.60	-0.3
4,945,071	-		ABI39_RS20015	0.60	+1.4
4,945,295	-		ABI39_RS20015	0.76	+1.3
4,945,316	+		ABI39_RS20015	0.78	+1.2
4,945,317	-		ABI39_RS20015	0.78	+0.7
4,945,399	-		ABI39_RS20015	0.84	+1.1
4,945,399	-		ABI39_RS20015	0.84	+0.7
4,945,469	+		ABI39_RS20015	0.89	+2.0
4,945,469	+		ABI39_RS20015	0.89	+0.8
4,945,571	-				+0.3
4,945,636	-				+0.8
4,945,639	-				+1.0
4,945,640	+				+0.7
4,945,640	+				+0.9
4,945,653	-				-0.3
4,945,657	+				-0.6
4,945,750	+				+5.2
4,945,845	-		ABI39_RS20020	0.13	-1.4
4,945,848	+		ABI39_RS20020	0.13	+3.7
4,946,002	+		ABI39_RS20020	0.23	+1.7
4,946,140	+		ABI39_RS20020	0.33	+3.4
4,946,285	+		ABI39_RS20020	0.43	+1.1
4,946,294	+		ABI39_RS20020	0.43	+0.5
4,946,357	+		ABI39_RS20020	0.47	+1.6
4,946,448	-		ABI39_RS20020	0.54	+1.1