Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS14320

Experiment: Galactan from Potato; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Galactan from Potato; filtered 2.5 mg/ml (C)
3,719,113	+		ABI39_RS14315	0.15	-0.7
3,719,114	-		ABI39_RS14315	0.15	+0.6
3,719,390	-		ABI39_RS14315	0.44	-0.8
3,719,392	+		ABI39_RS14315	0.44	+0.1
3,719,464	-		ABI39_RS14315	0.51	-0.7
3,719,470	+		ABI39_RS14315	0.52	+2.1
3,719,471	-		ABI39_RS14315	0.52	-1.1
3,719,471	-		ABI39_RS14315	0.52	+0.7
3,719,682	+		ABI39_RS14315	0.74	+0.1
3,719,698	+		ABI39_RS14315	0.76	-1.4
3,719,892	-				-1.3
3,719,892	-				+0.7
3,719,892	-				-1.3
3,719,926	-				+0.5
3,719,927	+				+0.8
3,719,973	-				+0.0
3,719,973	-				-0.4
3,720,059	-				+0.3
3,720,115	+				-0.3
3,720,116	-				+0.9
3,720,148	+				+0.8
3,720,148	+				+0.7
3,720,417	-		ABI39_RS14320	0.24	+0.6
3,720,432	+		ABI39_RS14320	0.25	+1.7
3,720,464	+		ABI39_RS14320	0.27	+1.1
3,720,783	-		ABI39_RS14320	0.52	+1.3
3,720,801	-		ABI39_RS14320	0.53	-0.3
3,721,070	+		ABI39_RS14320	0.74	-1.0
3,721,071	-		ABI39_RS14320	0.74	-0.5
3,721,166	+		ABI39_RS14320	0.81	+1.1
3,721,293	-				-0.0
3,721,338	-				+0.7
3,721,371	-				-1.2
3,721,371	-				-0.4
3,721,394	-				+1.3
3,721,510	+				-0.6
3,721,511	-				+1.7
3,721,512	+				+1.8
3,721,513	-				+0.4
3,721,513	-				+1.7
3,721,574	-				-0.4
3,721,577	-				-0.8
3,721,679	+				+1.4
3,721,679	+				+0.1
3,721,685	+				+0.4
3,721,685	+				+1.1
3,721,695	-				-0.8
3,721,886	+		ABI39_RS14325	0.27	-0.5
3,722,005	+		ABI39_RS14325	0.38	+2.5
3,722,064	+		ABI39_RS14325	0.44	+0.6
3,722,074	+		ABI39_RS14325	0.45	+0.3
3,722,116	+		ABI39_RS14325	0.49	+2.7
3,722,116	+		ABI39_RS14325	0.49	-0.8
3,722,217	+		ABI39_RS14325	0.58	+1.8
3,722,243	+		ABI39_RS14325	0.61	-0.0
3,722,243	+		ABI39_RS14325	0.61	-0.2
3,722,290	+		ABI39_RS14325	0.65	-0.1
3,722,290	+		ABI39_RS14325	0.65	+1.9
3,722,345	-		ABI39_RS14325	0.70	+1.3