Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS02365

Experiment: Galactan from Potato; filtered 2.5 mg/ml (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABI39_RS02360 and ABI39_RS02365 are separated by 34 nucleotidesABI39_RS02365 and ABI39_RS02370 are separated by 82 nucleotides ABI39_RS02360: ABI39_RS02360 - ribosome biogenesis GTPase Der, at 683,925 to 685,238 _RS02360 ABI39_RS02365: ABI39_RS02365 - GTPase Era, at 685,273 to 686,154 _RS02365 ABI39_RS02370: ABI39_RS02370 - ketoacyl-ACP synthase III, at 686,237 to 687,241 _RS02370 Position (kb) 685 686 687Strain fitness (log2 ratio) -1 0 1at 686.236 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Galactan from Potato; filtered 2.5 mg/ml (C)
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686,236 - -1.4

Or see this region's nucleotide sequence