Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS18780

Experiment: Galactan from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Galactan from Potato; autoclaved 2.5 mg/ml (C)
4,734,160	-		ABI39_RS18775	0.47	-0.3
4,734,160	-		ABI39_RS18775	0.47	+0.9
4,734,181	-		ABI39_RS18775	0.48	+0.5
4,734,211	-		ABI39_RS18775	0.50	-3.6
4,734,269	-		ABI39_RS18775	0.53	-1.0
4,734,343	-		ABI39_RS18775	0.57	-0.5
4,734,369	+		ABI39_RS18775	0.59	-0.6
4,734,374	+		ABI39_RS18775	0.59	-0.9
4,734,375	-		ABI39_RS18775	0.59	-1.1
4,734,460	+		ABI39_RS18775	0.63	+1.8
4,734,460	+		ABI39_RS18775	0.63	+0.5
4,734,527	+		ABI39_RS18775	0.67	-1.0
4,734,654	-		ABI39_RS18775	0.74	+0.9
4,734,655	+		ABI39_RS18775	0.74	+2.0
4,734,720	+		ABI39_RS18775	0.78	+0.2
4,734,721	-		ABI39_RS18775	0.78	+1.2
4,734,748	-		ABI39_RS18775	0.79	+0.1
4,734,750	+		ABI39_RS18775	0.79	-0.8
4,734,750	+		ABI39_RS18775	0.79	+1.3
4,734,754	-		ABI39_RS18775	0.79	-2.7
4,734,754	-		ABI39_RS18775	0.79	-1.5
4,734,754	-		ABI39_RS18775	0.79	-2.0
4,734,856	-		ABI39_RS18775	0.85	+1.7
4,734,857	+		ABI39_RS18775	0.85	+0.4
4,734,861	+		ABI39_RS18775	0.85	+0.1
4,734,862	-		ABI39_RS18775	0.85	+0.3
4,734,862	-		ABI39_RS18775	0.85	+1.4
4,734,969	+				-2.8
4,734,971	+				-0.1
4,735,127	-				+0.6
4,735,148	-				+0.3
4,735,169	+				-0.6
4,735,206	+				-1.5
4,735,258	+		ABI39_RS18780	0.12	+0.7
4,735,315	+		ABI39_RS18780	0.18	+0.5
4,735,344	-		ABI39_RS18780	0.21	+0.6
4,735,453	+		ABI39_RS18780	0.33	+0.6
4,735,474	+		ABI39_RS18780	0.35	+3.2
4,735,475	-		ABI39_RS18780	0.35	+0.4
4,735,475	-		ABI39_RS18780	0.35	+0.7
4,735,475	-		ABI39_RS18780	0.35	+0.8
4,735,538	-		ABI39_RS18780	0.42	-0.9
4,735,541	-		ABI39_RS18780	0.42	+2.1
4,735,566	-		ABI39_RS18780	0.45	+2.3
4,735,588	-		ABI39_RS18780	0.47	-2.1
4,735,607	+		ABI39_RS18780	0.49	+0.3
4,735,615	+		ABI39_RS18780	0.50	-2.4
4,735,721	+		ABI39_RS18780	0.61	+1.7
4,735,782	+		ABI39_RS18780	0.68	-0.9
4,735,848	+		ABI39_RS18780	0.75	+0.5
4,735,849	-		ABI39_RS18780	0.75	+0.4
4,736,004	+				-1.2
4,736,119	-				+0.4
4,736,404	+		ABI39_RS18785	0.33	-0.3
4,736,483	-		ABI39_RS18785	0.41	+0.3
4,736,504	-		ABI39_RS18785	0.44	+0.7
4,736,524	-		ABI39_RS18785	0.46	+0.0
4,736,622	+		ABI39_RS18785	0.56	-0.4
4,736,622	+		ABI39_RS18785	0.56	-2.0
4,736,623	-		ABI39_RS18785	0.56	+0.6
4,736,623	-		ABI39_RS18785	0.56	-0.1
4,736,639	-		ABI39_RS18785	0.58	+0.8
4,736,662	-		ABI39_RS18785	0.60	+0.2
4,736,766	+		ABI39_RS18785	0.71	-1.2
4,736,767	-		ABI39_RS18785	0.71	-1.3
4,736,868	+		ABI39_RS18785	0.82	-3.0
4,737,026	+				+1.5
4,737,076	+				-1.5